STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEM78269.1PFAM: 4-oxalocrotonate tautomerase; KEGG: tmt:Tmath_0739 4-oxalocrotonate tautomerase. (116 aa)    
Predicted Functional Partners:
AEM78746.1
PFAM: Aminotransferase, class I/II; KEGG: tbo:Thebr_1213 class I/II aminotransferase.
  
  
  0.914
hisC
TIGRFAM: Histidinol-phosphate aminotransferase; HAMAP: Histidinol-phosphate aminotransferase; KEGG: tit:Thit_1818 histidinol-phosphate aminotransferase; PFAM: Aminotransferase, class I/II; Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily.
    
  0.902
AEM78267.1
PFAM: Uncharacterised protein family UPF0150; KEGG: tmt:Tmath_0737 protein of unknown function UPF0150.
       0.675
AEM78268.1
YcfA family protein; PFAM: YcfA-like; KEGG: ate:Athe_2005 YcfA family protein.
       0.675
AEM79367.1
KEGG: thx:Thet_1886 hypothetical protein.
 
     0.621
AEM78273.1
Hypothetical protein; Manually curated.
 
     0.603
AEM78270.1
KEGG: thx:Thet_0686 hypothetical protein; TIGRFAM: Conserved hypothetical protein CHP02677; PFAM: Conserved hypothetical protein CHP02677.
 
     0.597
AEM78271.1
KEGG: tbo:Thebr_1648 hypothetical protein; TIGRFAM: Conserved hypothetical protein CHP02678; PFAM: Conserved hypothetical protein CHP02678.
 
     0.569
AEM78272.1
TIGRFAM: Conserved hypothetical protein CHP02680; KEGG: tit:Thit_0689 chromosome segregation ATPase-like protein.
 
     0.566
AEM78266.1
PFAM: Nucleotidyltransferase; KEGG: tbo:Thebr_1652 DNA polymerase beta domain-containing protein region.
       0.534
Your Current Organism:
Thermoanaerobacter wiegelii
NCBI taxonomy Id: 697303
Other names: T. wiegelii Rt8.B1, Thermoanaerobacter wiegelii Rt8.B1, Thermoanaerobacter wiegelii str. Rt8.B1, Thermoanaerobacter wiegelii strain Rt8.B1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.