STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEM78282.1Lysine-2,3-aminomutase; KEGG: tte:TTE0723 lysine 2,3-aminomutase; TIGRFAM: lysine-2,3-aminomutase; Protein of unknown function DUF160; PFAM: Radical SAM. (423 aa)    
Predicted Functional Partners:
AEM78285.1
PFAM: D-Lysine 5,6-aminomutase alpha subunit; KEGG: tte:TTE0726 D-lysine 5,6-aminomutase alpha subunit.
 
  
 0.990
AEM78286.1
Cobalamin B12-binding domain protein; PFAM: Cobalamin (vitamin B12)-binding; KEGG: tte:TTE0727 D-lysine 5,6-aminomutase beta subunit.
 
  
 0.990
AEM78281.1
KEGG: tte:TTE0722 hypothetical protein.
 
   
 0.903
AEM78283.1
KEGG: tte:TTE0724 hypothetical protein.
 
     0.902
AEM77612.1
PFAM: Orn/Lys/Arg decarboxylase, major region; Orn/Lys/Arg decarboxylase, C-terminal; KEGG: tbo:Thebr_2198 Orn/Lys/Arg decarboxylase major region.
     
  0.900
AEM78284.1
DNA mismatch repair protein MutS domain protein; Endonuclease that is involved in the suppression of homologous recombination and may therefore have a key role in the control of bacterial genetic diversity. Belongs to the DNA mismatch repair MutS family. MutS2 subfamily.
 
     0.880
AEM78279.1
KEGG: tte:TTE0718 acyl-CoA hydrolase.
 
   
 0.849
AEM78280.1
PFAM: Protein of unknown function DUF849, prokaryotic; KEGG: tte:TTE0719 hypothetical protein.
 
   
 0.810
lysA
Diaminopimelate decarboxylase; Specifically catalyzes the decarboxylation of meso- diaminopimelate (meso-DAP) to L-lysine.
     
 0.806
AEM78734.1
MCP methyltransferase, CheR-type; KEGG: tbo:Thebr_1201 protein-glutamate O-methyltransferase; PFAM: MCP methyltransferase, CheR-type; SMART: MCP methyltransferase, CheR-type.
    
   0.727
Your Current Organism:
Thermoanaerobacter wiegelii
NCBI taxonomy Id: 697303
Other names: T. wiegelii Rt8.B1, Thermoanaerobacter wiegelii Rt8.B1, Thermoanaerobacter wiegelii str. Rt8.B1, Thermoanaerobacter wiegelii strain Rt8.B1
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