STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEM78293.1PHP domain protein; PFAM: PHP, C-terminal; KEGG: tbo:Thebr_1589 protein-tyrosine-phosphatase. (259 aa)    
Predicted Functional Partners:
AEM78292.1
Capsular exopolysaccharide family; TIGRFAM: Exopolysaccharide synthesis protein; KEGG: tbo:Thebr_1590 capsular exopolysaccharide family.
  
 0.993
AEM78291.1
PFAM: Lipopolysaccharide biosynthesis; KEGG: thx:Thet_0698 lipopolysaccharide biosynthesis protein.
 
 
 0.979
AEM78290.1
KEGG: tbo:Thebr_1592 UTP-glucose-1-phosphate uridylyltransferase; TIGRFAM: UTP--glucose-1-phosphate uridylyltransferase, bacterial/archaeal type; PFAM: Nucleotidyl transferase.
  
  
 0.622
AEM78289.1
PFAM: Alpha-D-phosphohexomutase, alpha/beta/alpha domain I; Alpha-D-phosphohexomutase, alpha/beta/alpha domain II; Alpha-D-phosphohexomutase, alpha/beta/alpha domain III; Alpha-D-phosphohexomutase, C-terminal; KEGG: tbo:Thebr_1593 phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain II.
     
 0.480
AEM78401.1
PFAM: ATP-binding region, ATPase-like; KEGG: thx:Thet_0789 putative anti-sigma regulatory factor, serine/threonine protein kinase.
    
   0.445
AEM79733.1
KEGG: tte:TTE1049 anti-sigma regulatory factor (Ser/Thr protein kinase); PFAM: ATP-binding region, ATPase-like; SMART: ATP-binding region, ATPase-like.
    
   0.445
Your Current Organism:
Thermoanaerobacter wiegelii
NCBI taxonomy Id: 697303
Other names: T. wiegelii Rt8.B1, Thermoanaerobacter wiegelii Rt8.B1, Thermoanaerobacter wiegelii str. Rt8.B1, Thermoanaerobacter wiegelii strain Rt8.B1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.