STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEM78294.1KEGG: tbo:Thebr_1588 LytR/CpsA family cell envelope-related function transcriptional attenuator; TIGRFAM: Cell envelope-related transcriptional attenuator; PFAM: Cell envelope-related transcriptional attenuator. (303 aa)    
Predicted Functional Partners:
AEM78445.1
TIGRFAM: Competence protein ComEA, helix-hairpin-helix region; PFAM: Soluble ligand binding domain; Helix-hairpin-helix motif; KEGG: tmt:Tmath_0907 competence protein ComEA helix-hairpin-helix repeat protein; SMART: Helix-hairpin-helix DNA-binding motif, class 1.
 
     0.544
AEM78295.1
Hypothetical protein; Manually curated; KEGG: tbo:Thebr_1587 hypothetical protein.
       0.508
sepF
Cell division protein sepF; Cell division protein that is part of the divisome complex and is recruited early to the Z-ring. Probably stimulates Z-ring formation, perhaps through the cross-linking of FtsZ protofilaments. Its function overlaps with FtsA.
  
   
 0.456
AEM79430.1
KEGG: tmt:Tmath_1826 polysaccharide pyruvyl transferase CsaB; TIGRFAM: Polysaccharide pyruvyl transferase, CsaB; PFAM: Polysaccharide pyruvyl transferase.
 
     0.450
AEM77669.1
PFAM: Glycosyl transferase, family 4, conserved region; KEGG: tmt:Tmath_0189 glycosyl transferase, family 4, conserved region.
 
  
 0.437
AEM79429.1
Glycosyl transferase, WecB/TagA/CpsF family; Catalyzes the conversion of GlcNAc-PP-undecaprenol into ManNAc-GlcNAc-PP-undecaprenol, the first committed lipid intermediate in the de novo synthesis of teichoic acid.
 
   
 0.434
AEM78296.1
PFAM: Protein of unknown function DUF2225; KEGG: tbo:Thebr_1586 hypothetical protein.
       0.429
Your Current Organism:
Thermoanaerobacter wiegelii
NCBI taxonomy Id: 697303
Other names: T. wiegelii Rt8.B1, Thermoanaerobacter wiegelii Rt8.B1, Thermoanaerobacter wiegelii str. Rt8.B1, Thermoanaerobacter wiegelii strain Rt8.B1
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