Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AEM78356.1PFAM: Protein of unknown function DUF583; KEGG: tbo:Thebr_1527 hypothetical protein. (132 aa)    
Predicted Functional Partners:
AEM78357.1
PFAM: Peptidase M23; KEGG: tmt:Tmath_0826 peptidase M23.
 
   
 0.921
AEM78806.1
CheC, inhibitor of MCP methylation / FliN fusion protein; KEGG: tbo:Thebr_1273 flagellar motor switch protein FliN; TIGRFAM: Flagellar motor switch FliN; PFAM: Surface presentation of antigen (SpoA); CheC-like protein.
    
 
 0.761
AEM78358.1
KEGG: tte:TTE0842 hypothetical protein.
       0.512
AEM78359.1
Protein of unknown function UPF0180; PFAM: Uncharacterised protein family UPF0180; KEGG: tit:Thit_0789 protein of unknown function UPF0180.
       0.455
Your Current Organism:
Thermoanaerobacter wiegelii
NCBI taxonomy Id: 697303
Other names: T. wiegelii Rt8.B1, Thermoanaerobacter wiegelii Rt8.B1, Thermoanaerobacter wiegelii str. Rt8.B1, Thermoanaerobacter wiegelii strain Rt8.B1
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