STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEM78359.1Protein of unknown function UPF0180; PFAM: Uncharacterised protein family UPF0180; KEGG: tit:Thit_0789 protein of unknown function UPF0180. (83 aa)    
Predicted Functional Partners:
AEM78360.1
KEGG: tbo:Thebr_1524 hypothetical protein.
       0.732
AEM78715.1
KEGG: tbo:Thebr_1175 hypothetical protein.
  
     0.621
AEM78358.1
KEGG: tte:TTE0842 hypothetical protein.
       0.591
AEM77672.1
PFAM: Protein of unknown function DUF1779; KEGG: tmt:Tmath_0192 protein of unknown function DUF1779.
  
     0.590
AEM79685.1
KEGG: aoe:Clos_0429 hypothetical protein.
  
     0.580
AEM79390.1
KEGG: tbo:Thebr_0542 spore germination protein; TIGRFAM: Spore germination GerAB; PFAM: Spore germination GerAB.
  
     0.570
AEM78685.1
KEGG: tbo:Thebr_1145 stage II sporulation protein M; TIGRFAM: Sporulation stage II, protein M; PFAM: Protein of unknown function DUF95, transmembrane.
  
     0.563
AEM78024.1
KEGG: tbo:Thebr_1827 hypothetical protein.
  
     0.515
AEM78660.1
KEGG: thx:Thet_1373 stage III sporulation protein AF; TIGRFAM: Sporulation stage III, protein AF; PFAM: Sporulation stage III, protein AF.
  
     0.513
AEM79000.1
Hypothetical protein; Probable aspartic protease that is responsible for the proteolytic cleavage of the RNA polymerase sigma E factor (SigE/spoIIGB) to yield the active peptide in the mother cell during sporulation. Responds to a signal from the forespore that is triggered by the extracellular signal protein SpoIIR. Belongs to the peptidase U4 family.
  
     0.486
Your Current Organism:
Thermoanaerobacter wiegelii
NCBI taxonomy Id: 697303
Other names: T. wiegelii Rt8.B1, Thermoanaerobacter wiegelii Rt8.B1, Thermoanaerobacter wiegelii str. Rt8.B1, Thermoanaerobacter wiegelii strain Rt8.B1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.