Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
AEM78364.1ABC transporter related protein; KEGG: tte:TTE0848 ABC-type multidrug transport system, ATPase component; PFAM: ABC transporter-like; SMART: ATPase, AAA+ type, core. (240 aa)    
Predicted Functional Partners:
AEM78365.1
Hypothetical protein; Manually curated; KEGG: tte:TTE0849 hypothetical protein.
 
    0.956
AEM79270.1
PFAM: ABC-2 type transporter; KEGG: cac:CA_C3268 hypothetical protein.
 
  
 0.935
ecfA-2
ABC transporter related protein; ATP-binding (A) component of a common energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates.
 
   
0.887
AEM78366.1
Signal peptide peptidase SppA, 36K type; KEGG: tte:TTE0850 periplasmic serine protease (ClpP class); TIGRFAM: Peptidase S49, SppA; PFAM: Peptidase S49.
  
    0.755
AEM78367.1
PFAM: Nucleotidyltransferase; KEGG: tmt:Tmath_0834 DNA polymerase beta domain protein region.
       0.636
AEM78368.1
PFAM: Protein of unknown function DUF86; KEGG: tbo:Thebr_1517 hypothetical protein.
       0.636
AEM78363.1
KEGG: tbo:Thebr_1521 hypothetical protein.
       0.527
AEM78369.1
KEGG: tte:TTE0851 hypothetical protein.
       0.527
AEM79407.1
PFAM: ABC-2 type transporter; KEGG: tbo:Thebr_0521 ABC-2 type transporter.
 
 
 0.457
AEM78779.1
TIGRFAM: Peptidase M50, putative membrane-associated zinc metallopeptidase; PFAM: Peptidase M50; PDZ/DHR/GLGF; KEGG: tbo:Thebr_1246 membrane-associated zinc metalloprotease; SMART: PDZ/DHR/GLGF.
     
 0.417
Your Current Organism:
Thermoanaerobacter wiegelii
NCBI taxonomy Id: 697303
Other names: T. wiegelii Rt8.B1, Thermoanaerobacter wiegelii Rt8.B1, Thermoanaerobacter wiegelii str. Rt8.B1, Thermoanaerobacter wiegelii strain Rt8.B1
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