Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
AEM78367.1PFAM: Nucleotidyltransferase; KEGG: tmt:Tmath_0834 DNA polymerase beta domain protein region. (151 aa)    
Predicted Functional Partners:
AEM78368.1
PFAM: Protein of unknown function DUF86; KEGG: tbo:Thebr_1517 hypothetical protein.
 
     0.899
AEM78275.1
PFAM: Protein of unknown function DUF86; KEGG: tbo:Thebr_1598 hypothetical protein.
 
     0.743
AEM78365.1
Hypothetical protein; Manually curated; KEGG: tte:TTE0849 hypothetical protein.
 
   
 0.685
AEM78366.1
Signal peptide peptidase SppA, 36K type; KEGG: tte:TTE0850 periplasmic serine protease (ClpP class); TIGRFAM: Peptidase S49, SppA; PFAM: Peptidase S49.
       0.671
AEM78364.1
ABC transporter related protein; KEGG: tte:TTE0848 ABC-type multidrug transport system, ATPase component; PFAM: ABC transporter-like; SMART: ATPase, AAA+ type, core.
       0.636
AEM78369.1
KEGG: tte:TTE0851 hypothetical protein.
       0.634
AEM77826.1
KEGG: thx:Thet_0285 hypothetical protein.
  
     0.621
AEM79971.1
YycH family protein; PFAM: YycH; KEGG: tit:Thit_2309 YycH family protein.
  
     0.582
AEM77680.1
S-layer domain-containing protein; PFAM: S-layer homology region; KEGG: tte:TTE0166 S-layer-like domain-containing protein.
  
     0.555
AEM78813.1
PFAM: Flagellar hook-length control protein; KEGG: tbo:Thebr_1280 flagellar hook-length control protein-like, C-terminal domain-containing protein.
  
     0.530
Your Current Organism:
Thermoanaerobacter wiegelii
NCBI taxonomy Id: 697303
Other names: T. wiegelii Rt8.B1, Thermoanaerobacter wiegelii Rt8.B1, Thermoanaerobacter wiegelii str. Rt8.B1, Thermoanaerobacter wiegelii strain Rt8.B1
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