STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEM78373.1PFAM: Copper amine oxidase-like, N-terminal; KEGG: toc:Toce_1668 copper amine oxidase domain protein. (107 aa)    
Predicted Functional Partners:
AEM79267.1
PFAM: Copper amine oxidase-like, N-terminal; UvrB/UvrC protein; KEGG: ttm:Tthe_0320 copper amine oxidase domain protein.
  
     0.774
AEM77637.1
S-layer domain-containing protein; PFAM: S-layer homology region; KEGG: tit:Thit_0105 S-layer domain protein.
 
    0.758
AEM77681.1
S-layer domain-containing protein; PFAM: S-layer homology region; KEGG: tte:TTE0167 S-layer-like domain-containing protein.
 
   
 0.758
AEM79430.1
KEGG: tmt:Tmath_1826 polysaccharide pyruvyl transferase CsaB; TIGRFAM: Polysaccharide pyruvyl transferase, CsaB; PFAM: Polysaccharide pyruvyl transferase.
 
  
 0.739
AEM79432.1
KEGG: tit:Thit_1853 hypothetical protein.
  
     0.727
AEM79826.1
PFAM: Copper amine oxidase-like, N-terminal; KEGG: slp:Slip_1153 copper amine oxidase domain protein.
 
     0.703
AEM79914.1
S-layer domain-containing protein; PFAM: S-layer homology region; KEGG: tmt:Tmath_2162 S-layer domain protein.
 
  
 0.688
AEM78014.1
KEGG: tit:Thit_0459 hypothetical protein.
  
     0.659
AEM79918.1
KEGG: tmt:Tmath_2165 copper amine oxidase domain protein; PFAM: Copper amine oxidase-like, N-terminal; SH3, type 3; SMART: Bacterial SH3-like region.
  
     0.630
AEM78206.1
PFAM: O-antigen ligase-related; Tetratricopeptide TPR-1; KEGG: tmt:Tmath_0704 O-antigen polymerase.
  
     0.489
Your Current Organism:
Thermoanaerobacter wiegelii
NCBI taxonomy Id: 697303
Other names: T. wiegelii Rt8.B1, Thermoanaerobacter wiegelii Rt8.B1, Thermoanaerobacter wiegelii str. Rt8.B1, Thermoanaerobacter wiegelii strain Rt8.B1
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