STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEM78381.1KEGG: tte:TTE0866 xylanase/chitin deacetylase; TIGRFAM: Sporulation polysaccharide deacetylase, PdaB; PFAM: Polysaccharide deacetylase. (282 aa)    
Predicted Functional Partners:
AEM79726.1
PFAM: Glycosyl transferase, family 2; KEGG: aoe:Clos_0614 glycosyl transferase family protein.
  
 0.953
AEM78378.1
KEGG: tbo:Thebr_1512 glycoside hydrolase family 18; PFAM: Glycoside hydrolase, family 18, catalytic domain; SMART: Chitinase II.
 
    
 0.901
AEM79076.1
Glycoside hydrolase family 18; KEGG: tte:TTE1747 hypothetical protein; PFAM: Glycoside hydrolase, family 18, catalytic domain; SMART: Chitinase II.
 
    
 0.779
AEM79549.1
KEGG: tbo:Thebr_0459 peptidoglycan-binding domain 1 protein; PFAM: Peptidoglycan binding-like; Peptidoglycan-binding lysin domain; SMART: Peptidoglycan-binding Lysin subgroup.
    
 0.526
AEM78382.1
KEGG: tmt:Tmath_0847 amino acid permease-associated region; manually curated; PFAM: Amino acid permease-associated region.
       0.442
AEM79145.1
PFAM: Glycosyl transferase, family 2; KEGG: tbo:Thebr_0728 family 2 glycosyl transferase.
  
  
 0.437
Your Current Organism:
Thermoanaerobacter wiegelii
NCBI taxonomy Id: 697303
Other names: T. wiegelii Rt8.B1, Thermoanaerobacter wiegelii Rt8.B1, Thermoanaerobacter wiegelii str. Rt8.B1, Thermoanaerobacter wiegelii strain Rt8.B1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.