Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
AEM78398.1PFAM: Lytic transglycosylase-like, catalytic; KEGG: tbo:Thebr_1502 lytic transglycosylase. (186 aa)    
Predicted Functional Partners:
AEM78070.1
PFAM: Outer membrane protein, OmpA/MotB, C-terminal; KEGG: tbo:Thebr_1782 OmpA/MotB domain-containing protein.
 
  
 0.536
AEM78399.1
KEGG: thx:Thet_0787 hypothetical protein.
       0.533
AEM78402.1
PFAM: Putative Fe-S cluster; 4Fe-4S ferredoxin, iron-sulphur binding, subgroup; KEGG: tbo:Thebr_1498 Fe-S cluster domain-containing protein.
       0.528
AEM78401.1
PFAM: ATP-binding region, ATPase-like; KEGG: thx:Thet_0789 putative anti-sigma regulatory factor, serine/threonine protein kinase.
       0.514
AEM78400.1
KEGG: tbo:Thebr_1500 hypothetical protein.
     
 0.509
AEM78403.1
DRTGG domain protein; PFAM: DRTGG; KEGG: tbo:Thebr_1497 DRTGG domain-containing protein.
     
 0.506
AEM78404.1
KEGG: tbo:Thebr_1496 PHP domain-containing protein; PFAM: PHP, C-terminal; SMART: Polymerase/histidinol phosphatase, N-terminal.
       0.506
AEM79549.1
KEGG: tbo:Thebr_0459 peptidoglycan-binding domain 1 protein; PFAM: Peptidoglycan binding-like; Peptidoglycan-binding lysin domain; SMART: Peptidoglycan-binding Lysin subgroup.
  
  
 0.494
AEM79754.1
PFAM: Peptidase M23; KEGG: tmt:Tmath_0084 peptidase M23.
  
 0.458
AEM77686.1
KEGG: tbo:Thebr_2139 flagellar basal-body rod protein FlgF; TIGRFAM: Flagellar basal-body rod FlgF; Fagellar hook-basal body protein, FlgE/F/G; PFAM: Flagellar basal body rod protein, N-terminal; Protein of unknown function DUF1078, C-terminal.
  
 
 0.450
Your Current Organism:
Thermoanaerobacter wiegelii
NCBI taxonomy Id: 697303
Other names: T. wiegelii Rt8.B1, Thermoanaerobacter wiegelii Rt8.B1, Thermoanaerobacter wiegelii str. Rt8.B1, Thermoanaerobacter wiegelii strain Rt8.B1
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