STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEM78409.1KEGG: tbo:Thebr_1491 hydrogenase, Fe-only; TIGRFAM: Iron hydrogenase, subset; PFAM: Iron hydrogenase, large subunit, C-terminal; NADH:ubiquinone oxidoreductase, subunit G, iron-sulphur binding; Ferredoxin; 4Fe-4S ferredoxin, iron-sulphur binding, subgroup; Iron hydrogenase, small subunit-like. (581 aa)    
Predicted Functional Partners:
AEM78405.1
PFAM: NADH:ubiquinone oxidoreductase, 24kDa subunit; KEGG: tbo:Thebr_1495 NADH dehydrogenase (ubiquinone) 24 kDa subunit.
 
 0.999
AEM78408.1
PFAM: NADH:ubiquinone oxidoreductase, 51kDa subunit; Sucraseferredoxin-like; Soluble ligand binding domain; NADH ubiquinone oxidoreductase, F subunit, iron sulphur binding; 4Fe-4S ferredoxin, iron-sulphur binding, subgroup; KEGG: tbo:Thebr_1492 NADH dehydrogenase (quinone).
 
 0.998
AEM78407.1
KEGG: thx:Thet_0795 hypothetical protein.
 
 
 0.994
AEM78402.1
PFAM: Putative Fe-S cluster; 4Fe-4S ferredoxin, iron-sulphur binding, subgroup; KEGG: tbo:Thebr_1498 Fe-S cluster domain-containing protein.
 
 
 
0.989
AEM78507.1
PFAM: 4Fe-4S ferredoxin, iron-sulphur binding, subgroup; KEGG: thx:Thet_1500 4Fe-4S ferredoxin iron-sulfur-binding domain-containing protein.
   
 
 0.963
AEM79843.1
KEGG: elm:ELI_1213 NADH dehydrogenase subunit E.
 
 
 0.961
AEM79227.1
KEGG: thx:Thet_1782 radical SAM domain-containing protein; PFAM: Radical SAM; Biotin/thiamin synthesis-associated protein; SMART: Elongator protein 3/MiaB/NifB.
 
  
 0.887
AEM78136.1
KEGG: tbo:Thebr_1743 biotin and thiamin synthesis associated; PFAM: Biotin/thiamin synthesis-associated protein; Radical SAM; SMART: Elongator protein 3/MiaB/NifB.
 
   
 0.870
AEM78406.1
KEGG: thx:Thet_0794 histidine kinase; PFAM: ATP-binding region, ATPase-like; SMART: ATP-binding region, ATPase-like.
 
  
 0.834
AEM77560.1
PFAM: 4Fe-4S ferredoxin, iron-sulphur binding, subgroup; KEGG: fno:Fnod_1736 putative oxidoreductase.
  
 
 0.831
Your Current Organism:
Thermoanaerobacter wiegelii
NCBI taxonomy Id: 697303
Other names: T. wiegelii Rt8.B1, Thermoanaerobacter wiegelii Rt8.B1, Thermoanaerobacter wiegelii str. Rt8.B1, Thermoanaerobacter wiegelii strain Rt8.B1
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