Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-expression
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[Homology]
Score
AEM78442.1Cobalamin B12-binding domain protein; PFAM: Cobalamin (vitamin B12)-binding; KEGG: tbo:Thebr_1459 cobalamin B12-binding domain-containing protein. (550 aa)    
Predicted Functional Partners:
AEM78441.1
NAD/NADP octopine/nopaline dehydrogenase; PFAM: Opine dehydrogenase; NADP oxidoreductase, coenzyme F420-dependent; KEGG: tbo:Thebr_1460 NAD/NADP octopine/nopaline dehydrogenase.
 
     0.949
AEM78612.1
TIGRFAM: Conserved hypothetical protein CHP01319, GlmL; KEGG: thx:Thet_1421 hypothetical protein.
     0.787
AEM79677.1
KEGG: tte:TTE2388 methylmalonyl-CoA mutase C-terminal domain-containing protein; TIGRFAM: Methylmalonyl-CoA mutase, C-terminal; PFAM: Cobalamin (vitamin B12)-binding.
   
 
 0.754
AEM78285.1
PFAM: D-Lysine 5,6-aminomutase alpha subunit; KEGG: tte:TTE0726 D-lysine 5,6-aminomutase alpha subunit.
   
 
 0.684
AEM78610.1
KEGG: thx:Thet_1423 hypothetical protein.
 
 
   0.574
AEM78443.1
KEGG: tbo:Thebr_1458 asparagine synthase; TIGRFAM: Asparagine synthase, glutamine-hydrolyzing; PFAM: Asparagine synthase; Glutamine amidotransferase, class-II.
       0.557
lgt
Prolipoprotein diacylglyceryl transferase; Catalyzes the transfer of the diacylglyceryl group from phosphatidylglycerol to the sulfhydryl group of the N-terminal cysteine of a prolipoprotein, the first step in the formation of mature lipoproteins; Belongs to the Lgt family.
  
     0.489
AEM77988.1
KEGG: tmt:Tmath_0523 hypothetical protein.
 
 
   0.431
AEM78440.1
PFAM: YheO-like; KEGG: tbo:Thebr_1461 YheO-like domain-containing protein.
       0.423
AEM78898.1
Asp/Glu/hydantoin racemase; Provides the (R)-glutamate required for cell wall biosynthesis.
 
   
 0.410
Your Current Organism:
Thermoanaerobacter wiegelii
NCBI taxonomy Id: 697303
Other names: T. wiegelii Rt8.B1, Thermoanaerobacter wiegelii Rt8.B1, Thermoanaerobacter wiegelii str. Rt8.B1, Thermoanaerobacter wiegelii strain Rt8.B1
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