STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEM78455.1PFAM: Transposase, IS4-like; KEGG: tbo:Thebr_1887 transposase IS4 family protein. (425 aa)    
Predicted Functional Partners:
AEM80006.1
Helix-turn-helix domain protein; KEGG: tit:Thit_2376 transcriptional regulator, XRE family; PFAM: Helix-turn-helix type 3; SMART: Helix-turn-helix type 3; Tetratricopeptide repeat.
  
    0.562
AEM79367.1
KEGG: thx:Thet_1886 hypothetical protein.
 
     0.538
AEM79359.1
KEGG: tbo:Thebr_0569 hypothetical protein.
  
     0.504
AEM78456.1
PFAM: Haloacid dehalogenase-like hydrolase; KEGG: thx:Thet_0841 haloacid dehalogenase domain-containing protein hydrolase.
       0.499
AEM78457.1
KEGG: tbo:Thebr_1442 beta-lactamase domain-containing protein.
       0.499
AEM78458.1
KEGG: tbo:Thebr_1441 DNA internalization-like competence protein ComEC/Rec2; TIGRFAM: Competence protein ComEC/Rec2; ComEC/Rec2-related protein; PFAM: ComEC/Rec2-related protein.
       0.499
AEM78459.1
KEGG: thx:Thet_0844 DNA polymerase III subunit delta; TIGRFAM: DNA polymerase III, delta subunit; PFAM: DNA polymerase III, delta.
       0.499
AEM77584.1
PFAM: Beta-galactosidase trimerisation; Glycoside hydrolase, family 5; KEGG: tbo:Thebr_2228 beta-galactosidase trimerisation domain-containing protein; Belongs to the glycosyl hydrolase 5 (cellulase A) family.
  
     0.467
AEM79744.1
KEGG: tbo:Thebr_2259 hypothetical protein.
  
     0.444
AEM79451.1
KEGG: thx:Thet_2276 hypothetical protein.
  
     0.416
Your Current Organism:
Thermoanaerobacter wiegelii
NCBI taxonomy Id: 697303
Other names: T. wiegelii Rt8.B1, Thermoanaerobacter wiegelii Rt8.B1, Thermoanaerobacter wiegelii str. Rt8.B1, Thermoanaerobacter wiegelii strain Rt8.B1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.