STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEM78465.1PFAM: Glycosyl transferase, group 1; KEGG: tmt:Tmath_0930 glycosyl transferase group 1. (372 aa)    
Predicted Functional Partners:
AEM78464.1
Hypothetical protein; Manually curated; KEGG: tbo:Thebr_1435 hypothetical protein.
 
  
 0.834
AEM78466.1
KEGG: tbo:Thebr_1433 hypothetical protein.
       0.782
lepA
GTP-binding protein lepA; Required for accurate and efficient protein synthesis under certain stress conditions. May act as a fidelity factor of the translation reaction, by catalyzing a one-codon backward translocation of tRNAs on improperly translocated ribosomes. Back-translocation proceeds from a post-translocation (POST) complex to a pre- translocation (PRE) complex, thus giving elongation factor G a second chance to translocate the tRNAs correctly. Binds to ribosomes in a GTP- dependent manner.
  
  
 0.703
AEM78468.1
Oxygen-independent coproporphyrinogen III oxidase; Probably acts as a heme chaperone, transferring heme to an unknown acceptor. Binds one molecule of heme per monomer, possibly covalently. Binds 1 [4Fe-4S] cluster. The cluster is coordinated with 3 cysteines and an exchangeable S-adenosyl-L-methionine. Belongs to the anaerobic coproporphyrinogen-III oxidase family.
  
    0.681
AEM79430.1
KEGG: tmt:Tmath_1826 polysaccharide pyruvyl transferase CsaB; TIGRFAM: Polysaccharide pyruvyl transferase, CsaB; PFAM: Polysaccharide pyruvyl transferase.
 
  
 0.621
AEM78218.1
KEGG: toc:Toce_0502 nucleotide sugar dehydrogenase; TIGRFAM: Nucleotide sugar dehydrogenase; PFAM: UDP-glucose/GDP-mannose dehydrogenase, N-terminal; UDP-glucose/GDP-mannose dehydrogenase, dimerisation; UDP-glucose/GDP-mannose dehydrogenase, C-terminal.
 
  
 0.618
AEM78227.1
PFAM: NAD-dependent epimerase/dehydratase; KEGG: tit:Thit_0665 NAD-dependent epimerase/dehydratase.
 
  
 0.606
AEM78679.1
PFAM: Glycosyl transferase, family 2; KEGG: tbo:Thebr_1139 family 2 glycosyl transferase.
 
 
 0.572
AEM79389.1
PFAM: Nucleotidyl transferase; Bacterial transferase hexapeptide repeat; Alpha-D-phosphohexomutase, alpha/beta/alpha domain I; KEGG: thx:Thet_1903 nucleotidyl transferase.
 
 
 0.555
AEM78231.1
dTDP-4-dehydrorhamnose 3,5-epimerase; Catalyzes the epimerization of the C3' and C5'positions of dTDP-6-deoxy-D-xylo-4-hexulose, forming dTDP-6-deoxy-L-lyxo-4-hexulose. Belongs to the dTDP-4-dehydrorhamnose 3,5-epimerase family.
  
  
 0.536
Your Current Organism:
Thermoanaerobacter wiegelii
NCBI taxonomy Id: 697303
Other names: T. wiegelii Rt8.B1, Thermoanaerobacter wiegelii Rt8.B1, Thermoanaerobacter wiegelii str. Rt8.B1, Thermoanaerobacter wiegelii strain Rt8.B1
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