STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEM78483.1TIGRFAM: HDIG; PFAM: Metal-dependent phosphohydrolase, 7TM extracellular region; Metal-dependent phosphohydrolase, 7TM intracellular region; Metal-dependent phosphohydrolase, HD region, subdomain; KEGG: tbo:Thebr_1396 metal dependent phosphohydrolase; SMART: Metal-dependent phosphohydrolase, HD region. (688 aa)    
Predicted Functional Partners:
ybeY
Metalloprotease ybeY; Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA.
  
  
 0.887
AEM78485.1
KEGG: tbo:Thebr_1394 diacylglycerol kinase; PFAM: Diacylglycerol kinase, prokaryotic; Phosphatidic acid phosphatase type 2/haloperoxidase; SMART: Phosphatidic acid phosphatase type 2/haloperoxidase.
  
    0.864
AEM78482.1
PFAM: PhoH-like protein; KEGG: tbo:Thebr_1397 PhoH family protein.
     
 0.857
AEM78480.1
Sporulation protein YqfC; TIGRFAM: Protein of unknown function DUF1429; KEGG: tbo:Thebr_1399 hypothetical protein.
 
     0.855
AEM78481.1
KEGG: tbo:Thebr_1398 sporulation protein YqfD; TIGRFAM: Putative stage IV sporulation YqfD; PFAM: Putative stage IV sporulation YqfD.
       0.851
AEM78479.1
PFAM: Asparaginase/glutaminase; KEGG: thx:Thet_1569 asparaginase/glutaminase.
       0.533
Your Current Organism:
Thermoanaerobacter wiegelii
NCBI taxonomy Id: 697303
Other names: T. wiegelii Rt8.B1, Thermoanaerobacter wiegelii Rt8.B1, Thermoanaerobacter wiegelii str. Rt8.B1, Thermoanaerobacter wiegelii strain Rt8.B1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.