STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEM78504.1PFAM: HTH transcriptional regulator, LysR; KEGG: tte:TTE0987 transcriptional regulator; Belongs to the LysR transcriptional regulatory family. (82 aa)    
Predicted Functional Partners:
AEM78506.1
PFAM: Alpha/beta hydrolase fold-1; KEGG: tbo:Thebr_0986 alpha/beta hydrolase fold protein.
 
  
 0.657
AEM78505.1
PFAM: NADH:flavin oxidoreductase/NADH oxidase, N-terminal; FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: tbo:Thebr_0985 NADH:flavin oxidoreductase/NADH oxidase.
  
  
 0.615
AEM78503.1
KEGG: tbo:Thebr_0984 PfpI familyintracellular protease; TIGRFAM: Peptidase C56, PfpI; PFAM: ThiJ/PfpI.
 
   
 0.535
AEM79712.1
TIGRFAM: Diguanylate cyclase, predicted; PFAM: Diguanylate phosphodiesterase, predicted; Diguanylate cyclase, predicted; KEGG: tbo:Thebr_0292 EAL domain-containing protein; SMART: Diguanylate phosphodiesterase, predicted; Diguanylate cyclase, predicted.
  
  
 0.511
AEM78507.1
PFAM: 4Fe-4S ferredoxin, iron-sulphur binding, subgroup; KEGG: thx:Thet_1500 4Fe-4S ferredoxin iron-sulfur-binding domain-containing protein.
  
 
 0.430
Your Current Organism:
Thermoanaerobacter wiegelii
NCBI taxonomy Id: 697303
Other names: T. wiegelii Rt8.B1, Thermoanaerobacter wiegelii Rt8.B1, Thermoanaerobacter wiegelii str. Rt8.B1, Thermoanaerobacter wiegelii strain Rt8.B1
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