STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEM78511.1KEGG: tbo:Thebr_0989 radical SAM domain-containing protein; PFAM: Radical SAM; Cobalamin (vitamin B12)-binding; SMART: Elongator protein 3/MiaB/NifB. (562 aa)    
Predicted Functional Partners:
AEM78513.1
KEGG: tbo:Thebr_0991 major facilitator superfamily protein; manually curated; PFAM: Major facilitator superfamily MFS-1.
 
  
 0.664
AEM78512.1
PFAM: Glycerophosphoryl diester phosphodiesterase; KEGG: tbo:Thebr_0990 glycerophosphoryl diester phosphodiesterase.
       0.602
AEM78510.1
PFAM: Peptidase M48, Ste24p; KEGG: thx:Thet_1499 STE24 endopeptidase.
       0.532
AEM78514.1
KEGG: tit:Thit_0955 Appr-1-p processing domain protein; PFAM: Appr-1-p processing; SMART: Appr-1-p processing.
       0.464
Your Current Organism:
Thermoanaerobacter wiegelii
NCBI taxonomy Id: 697303
Other names: T. wiegelii Rt8.B1, Thermoanaerobacter wiegelii Rt8.B1, Thermoanaerobacter wiegelii str. Rt8.B1, Thermoanaerobacter wiegelii strain Rt8.B1
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