STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEM78514.1KEGG: tit:Thit_0955 Appr-1-p processing domain protein; PFAM: Appr-1-p processing; SMART: Appr-1-p processing. (174 aa)    
Predicted Functional Partners:
AEM79142.1
Hypothetical protein; Manually curated.
      0.711
cmk
TIGRFAM: Cytidylate kinase; HAMAP: Cytidylate kinase; KEGG: tbo:Thebr_1196 cytidylate kinase; PFAM: Cytidylate kinase region; Shikimate kinase.
 
      0.674
AEM78512.1
PFAM: Glycerophosphoryl diester phosphodiesterase; KEGG: tbo:Thebr_0990 glycerophosphoryl diester phosphodiesterase.
  
    0.614
AEM78513.1
KEGG: tbo:Thebr_0991 major facilitator superfamily protein; manually curated; PFAM: Major facilitator superfamily MFS-1.
       0.597
AEM78511.1
KEGG: tbo:Thebr_0989 radical SAM domain-containing protein; PFAM: Radical SAM; Cobalamin (vitamin B12)-binding; SMART: Elongator protein 3/MiaB/NifB.
       0.464
AEM78248.1
Manually curated; PFAM: SNF2-related; KEGG: tit:Thit_0661 SNF2-related protein; SMART: DEAD-like helicase, N-terminal.
   
   0.410
Your Current Organism:
Thermoanaerobacter wiegelii
NCBI taxonomy Id: 697303
Other names: T. wiegelii Rt8.B1, Thermoanaerobacter wiegelii Rt8.B1, Thermoanaerobacter wiegelii str. Rt8.B1, Thermoanaerobacter wiegelii strain Rt8.B1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.