STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
sspITIGRFAM: Small acid-soluble spore protein, SspI; KEGG: tbo:Thebr_0995 small, acid-soluble spore protein I; Belongs to the SspI family. (66 aa)    
Predicted Functional Partners:
tlp
KEGG: tbo:Thebr_1998 small, acid-soluble spore protein tlp; TIGRFAM: Small acid-soluble spore protein, thioredoxin-like; HAMAP: Small, acid-soluble spore protein tlp; Belongs to the Tlp family.
  
    0.667
AEM79691.1
PFAM: Protein of unknown function DUF2275, transmembrane; KEGG: tit:Thit_2064 putative transmembrane anti-sigma factor.
  
     0.474
AEM77679.1
KEGG: tte:TTE0165 hypothetical protein; PFAM: Cell surface receptor IPT/TIG; Fibronectin, type III; SMART: Fibronectin, type III; Cell surface receptor IPT/TIG.
  
     0.463
AEM79693.1
KEGG: tit:Thit_2066 hypothetical protein.
  
     0.447
Your Current Organism:
Thermoanaerobacter wiegelii
NCBI taxonomy Id: 697303
Other names: T. wiegelii Rt8.B1, Thermoanaerobacter wiegelii Rt8.B1, Thermoanaerobacter wiegelii str. Rt8.B1, Thermoanaerobacter wiegelii strain Rt8.B1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.