STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEM78548.1LmbE family protein; PFAM: N-acetylglucosaminyl phosphatidylinositol deacetylase; KEGG: cob:COB47_0277 LmbE family protein. (450 aa)    
Predicted Functional Partners:
AEM77826.1
KEGG: thx:Thet_0285 hypothetical protein.
 
     0.639
AEM79971.1
YycH family protein; PFAM: YycH; KEGG: tit:Thit_2309 YycH family protein.
  
     0.633
mgsA
Methylglyoxal synthase; Catalyzes the formation of methylglyoxal from dihydroxyacetone phosphate.
  
  
 0.572
AEM77680.1
S-layer domain-containing protein; PFAM: S-layer homology region; KEGG: tte:TTE0166 S-layer-like domain-containing protein.
  
     0.556
AEM78549.1
ROK family protein; PFAM: ROK; KEGG: tbo:Thebr_1017 ROK family protein.
     
 0.551
nagB
Glucosamine-6-phosphate deaminase; Catalyzes the reversible isomerization-deamination of glucosamine 6-phosphate (GlcN6P) to form fructose 6-phosphate (Fru6P) and ammonium ion.
     
 0.551
AEM79367.1
KEGG: thx:Thet_1886 hypothetical protein.
  
    0.516
AEM79970.1
PFAM: Protein of unknown function YycH; KEGG: tit:Thit_2308 protein of unknown function YycH.
  
     0.498
AEM79143.1
HIRAN domain-containing protein; PFAM: HIP116, Rad5p N-terminal; KEGG: tbo:Thebr_0730 hypothetical protein.
  
     0.494
AEM77629.1
KEGG: tbo:Thebr_2185 metal dependent phosphohydrolase; TIGRFAM: HDIG; PFAM: Polynucleotide adenylyltransferase region; Metal-dependent phosphohydrolase, HD region, subdomain; Belongs to the tRNA nucleotidyltransferase/poly(A) polymerase family.
  
  
 0.485
Your Current Organism:
Thermoanaerobacter wiegelii
NCBI taxonomy Id: 697303
Other names: T. wiegelii Rt8.B1, Thermoanaerobacter wiegelii Rt8.B1, Thermoanaerobacter wiegelii str. Rt8.B1, Thermoanaerobacter wiegelii strain Rt8.B1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.