Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
AEM78552.1KEGG: cow:Calow_1350 ABC transporter-like protein; PFAM: ABC transporter-like; SMART: ATPase, AAA+ type, core. (232 aa)    
Predicted Functional Partners:
AEM78597.1
PFAM: Protein of unknown function DUF214, permase predicted; KEGG: tte:TTE1198 ABC-type transport systems, involved in lipoprotein release, permease components.
 
 0.969
AEM77757.1
PFAM: Protein of unknown function DUF214, permase predicted; KEGG: tbo:Thebr_2062 hypothetical protein.
 
 0.968
AEM79854.1
KEGG: thx:Thet_2294 ABC transporter-like protein; PFAM: ABC transporter-like; ABC transporter, transmembrane region; SMART: ATPase, AAA+ type, core.
   
0.680
AEM79437.1
KEGG: tbo:Thebr_0498 outer membrane lipoprotein-sorting protein-like protein.
   
 
 0.675
AEM80004.1
KEGG: cpo:COPRO5265_0264 ABC-type multidrug/protein/lipid transport system, ATPase component; PFAM: ABC transporter-like; ABC transporter, transmembrane region; SMART: ATPase, AAA+ type, core.
   
0.523
rpsE
Ribosomal protein S5; Located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body. Belongs to the universal ribosomal protein uS5 family.
  
   
 0.463
AEM78555.1
Thioredoxin; KEGG: tbo:Thebr_1021 thioredoxin; TIGRFAM: Thioredoxin; PFAM: Thioredoxin domain; Belongs to the thioredoxin family.
 
 
   0.425
AEM78553.1
PFAM: Cytochrome c assembly protein, transmembrane region; KEGG: tbo:Thebr_1019 cytochrome c biogenesis protein transmembrane region.
  
  
 0.410
AEM78599.1
Efflux transporter, RND family, MFP subunit; TIGRFAM: Secretion protein HlyD; KEGG: tbo:Thebr_1059 RND family efflux transporter MFP subunit; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
  
 
 0.407
Your Current Organism:
Thermoanaerobacter wiegelii
NCBI taxonomy Id: 697303
Other names: T. wiegelii Rt8.B1, Thermoanaerobacter wiegelii Rt8.B1, Thermoanaerobacter wiegelii str. Rt8.B1, Thermoanaerobacter wiegelii strain Rt8.B1
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