STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEM78587.1PFAM: Radical SAM; KEGG: tmt:Tmath_1071 radical SAM domain protein. (461 aa)    
Predicted Functional Partners:
AEM78586.1
Hypothetical protein; Manually curated; KEGG: tmt:Tmath_1070 hypothetical protein.
 
 
 
 0.983
AEM78588.1
Carbonic anhydrase; Manually curated; KEGG: tmt:Tmath_1072 carbonic anhydrase.
       0.798
secD
Protein-export membrane protein SecD; Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA.
     
 0.776
secF
Protein-export membrane protein SecF; Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA.
     
 0.747
AEM77621.1
KEGG: tte:TTE0101 hypothetical protein.
  
 
 0.593
AEM78464.1
Hypothetical protein; Manually curated; KEGG: tbo:Thebr_1435 hypothetical protein.
  
 
 0.593
AEM79080.1
PFAM: Protein of unknown function DUF633; KEGG: tbo:Thebr_0762 hypothetical protein.
  
     0.557
AEM78592.1
KEGG: tbo:Thebr_1052 single-stranded-DNA-specific exonuclease RecJ; TIGRFAM: Bacterial RecJ exonuclease; PFAM: Phosphoesterase, RecJ-like; Phosphoesterase, DHHA1.
       0.552
apt
Adenine phosphoribosyltransferase; Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis.
     
 0.542
AEM78585.1
KEGG: tmt:Tmath_1069 hypothetical protein.
       0.523
Your Current Organism:
Thermoanaerobacter wiegelii
NCBI taxonomy Id: 697303
Other names: T. wiegelii Rt8.B1, Thermoanaerobacter wiegelii Rt8.B1, Thermoanaerobacter wiegelii str. Rt8.B1, Thermoanaerobacter wiegelii strain Rt8.B1
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