STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEM78613.1Hypothetical protein; Manually curated; KEGG: tmt:Tmath_1092 alanine racemase domain protein. (354 aa)    
Predicted Functional Partners:
AEM78610.1
KEGG: thx:Thet_1423 hypothetical protein.
 
  
  0.994
AEM78611.1
Cobalamin B12-binding domain protein; PFAM: Cobalamin (vitamin B12)-binding; D-Lysine 5,6-aminomutase alpha subunit; KEGG: tbo:Thebr_1071 cobalamin B12-binding domain-containing protein.
 
  
 0.994
AEM78607.1
PFAM: Dihydrodipicolinate reductase; KEGG: thx:Thet_1426 dihydrodipicolinate reductase.
 
   
 0.950
AEM78609.1
PFAM: Pyridoxal phosphate-dependent enzyme, beta subunit; KEGG: tbo:Thebr_1069 pyridoxal-5'-phosphate-dependent protein subunit beta.
 
   
 0.948
AEM78608.1
KEGG: tbo:Thebr_1068 hypothetical protein.
 
     0.945
AEM78612.1
TIGRFAM: Conserved hypothetical protein CHP01319, GlmL; KEGG: thx:Thet_1421 hypothetical protein.
 
     0.942
arcA
KEGG: tbo:Thebr_2192 arginine deiminase; HAMAP: Arginine deiminase; PFAM: Amidinotransferase.
 
  
  0.839
arcA-2
KEGG: tbo:Thebr_1794 arginine deiminase; HAMAP: Arginine deiminase; PFAM: Amidinotransferase.
 
  
  0.836
AEM78060.1
Ornithine carbamoyltransferase; Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline.
    
 0.820
argH
TIGRFAM: Argininosuccinate lyase; HAMAP: Argininosuccinate lyase; KEGG: tmt:Tmath_2083 argininosuccinate lyase; PFAM: Fumarate lyase.
     
  0.800
Your Current Organism:
Thermoanaerobacter wiegelii
NCBI taxonomy Id: 697303
Other names: T. wiegelii Rt8.B1, Thermoanaerobacter wiegelii Rt8.B1, Thermoanaerobacter wiegelii str. Rt8.B1, Thermoanaerobacter wiegelii strain Rt8.B1
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