STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEM78620.1PFAM: Protein of unknown function DUF965, bacterial; KEGG: tit:Thit_1042 protein of unknown function DUF965; Belongs to the UPF0297 family. (85 aa)    
Predicted Functional Partners:
AEM78621.1
Holliday junction resolvase; Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA; Belongs to the YqgF HJR family.
  
    0.939
AEM78622.1
PFAM: Protein of unknown function DUF1292; KEGG: thx:Thet_1411 hypothetical protein.
  
  
 0.790
AEM78840.1
UPF0122 protein; Might take part in the signal recognition particle (SRP) pathway. This is inferred from the conservation of its genetic proximity to ftsY/ffh. May be a regulatory protein.
 
     0.754
AEM80020.1
PFAM: Protein of unknown function DUF951, bacterial; KEGG: tbo:Thebr_2321 hypothetical protein.
  
     0.744
AEM79080.1
PFAM: Protein of unknown function DUF633; KEGG: tbo:Thebr_0762 hypothetical protein.
  
     0.733
alaS
alanyl-tRNA synthetase; Catalyzes the attachment of alanine to tRNA(Ala) in a two- step reaction: alanine is first activated by ATP to form Ala-AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain.
  
    0.730
AEM78892.1
PFAM: Fibronectin-binding A, N-terminal; Protein of unknown function DUF814; KEGG: tmt:Tmath_1373 fibronectin-binding A domain protein.
  
     0.668
AEM78869.1
PFAM: Protein of unknown function DUF322; KEGG: tbo:Thebr_1336 hypothetical protein.
  
    0.634
whiA
Sporulation transcription regulator whiA; Involved in cell division and chromosome segregation.
  
     0.625
sepF
Cell division protein sepF; Cell division protein that is part of the divisome complex and is recruited early to the Z-ring. Probably stimulates Z-ring formation, perhaps through the cross-linking of FtsZ protofilaments. Its function overlaps with FtsA.
  
  
 0.611
Your Current Organism:
Thermoanaerobacter wiegelii
NCBI taxonomy Id: 697303
Other names: T. wiegelii Rt8.B1, Thermoanaerobacter wiegelii Rt8.B1, Thermoanaerobacter wiegelii str. Rt8.B1, Thermoanaerobacter wiegelii strain Rt8.B1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.