Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
AEM78629.1PFAM: Peptidase U32; KEGG: tbo:Thebr_1089 peptidase U32. (405 aa)    
Predicted Functional Partners:
AEM78628.1
PFAM: O-methyltransferase, family 3; KEGG: tbo:Thebr_1088 O-methyltransferase family 3.
 
  
 0.940
AEM78408.1
PFAM: NADH:ubiquinone oxidoreductase, 51kDa subunit; Sucraseferredoxin-like; Soluble ligand binding domain; NADH ubiquinone oxidoreductase, F subunit, iron sulphur binding; 4Fe-4S ferredoxin, iron-sulphur binding, subgroup; KEGG: tbo:Thebr_1492 NADH dehydrogenase (quinone).
  
   0.837
mltG
Aminodeoxychorismate lyase; Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation. Belongs to the transglycosylase MltG family.
  
    0.821
AEM78630.1
PFAM: Penicillin-binding protein, transpeptidase; KEGG: tbo:Thebr_1090 penicillin-binding protein transpeptidase.
       0.635
AEM78625.1
PFAM: Protein of unknown function DUF964; KEGG: tbo:Thebr_1085 hypothetical protein; Belongs to the UPF0342 family.
       0.561
AEM78626.1
PFAM: Protein of unknown function DUF988; KEGG: thx:Thet_1407 hypothetical protein.
       0.546
rnj
Ribocuclease J; An RNase that has 5'-3' exonuclease and possibly endonuclease activity. Involved in maturation of rRNA and in some organisms also mRNA maturation and/or decay.
       0.533
aroE
Shikimate dehydrogenase; Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA).
 
    0.527
AEM78631.1
RNA polymerase, sigma 28 subunit, SigK; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released.
       0.494
AEM77558.1
PFAM: NADH:ubiquinone oxidoreductase, 30kDa subunit; KEGG: tme:Tmel_1220 NADH dehydrogenase (ubiquinone), 30 kDa subunit.
   
   0.491
Your Current Organism:
Thermoanaerobacter wiegelii
NCBI taxonomy Id: 697303
Other names: T. wiegelii Rt8.B1, Thermoanaerobacter wiegelii Rt8.B1, Thermoanaerobacter wiegelii str. Rt8.B1, Thermoanaerobacter wiegelii strain Rt8.B1
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