STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEM78630.1PFAM: Penicillin-binding protein, transpeptidase; KEGG: tbo:Thebr_1090 penicillin-binding protein transpeptidase. (535 aa)    
Predicted Functional Partners:
AEM78416.1
KEGG: tbo:Thebr_1484 penicillin-binding protein 2; manually curated; PFAM: Penicillin-binding protein, dimerisation domain.
  
  
0.930
AEM79320.1
PFAM: Cell cycle protein; KEGG: tbo:Thebr_0587 cell cycle protein; Belongs to the SEDS family.
 
 0.911
rodA
Rod shape-determining protein RodA; Peptidoglycan polymerase that is essential for cell wall elongation; Belongs to the SEDS family. MrdB/RodA subfamily.
 
 0.905
AEM79008.1
KEGG: tbo:Thebr_0834 stage V sporulation protein E; TIGRFAM: Stage V sporulation protein E; Cell division protein FtsW; PFAM: Cell cycle protein; Belongs to the SEDS family.
 
 0.888
AEM78414.1
Rod shape-determining protein MreC; Involved in formation and maintenance of cell shape.
 
 
 0.762
AEM79005.1
Polypeptide-transport-associated domain protein FtsQ-type; Essential cell division protein.
  
 
 0.697
murC
UDP-N-acetylmuramate--L-alanine ligase; Cell wall formation; Belongs to the MurCDEF family.
 
 
 0.685
mltG
Aminodeoxychorismate lyase; Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation. Belongs to the transglycosylase MltG family.
     
 0.660
AEM78628.1
PFAM: O-methyltransferase, family 3; KEGG: tbo:Thebr_1088 O-methyltransferase family 3.
       0.654
AEM78629.1
PFAM: Peptidase U32; KEGG: tbo:Thebr_1089 peptidase U32.
       0.646
Your Current Organism:
Thermoanaerobacter wiegelii
NCBI taxonomy Id: 697303
Other names: T. wiegelii Rt8.B1, Thermoanaerobacter wiegelii Rt8.B1, Thermoanaerobacter wiegelii str. Rt8.B1, Thermoanaerobacter wiegelii strain Rt8.B1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.