STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEM78634.1KEGG: tbo:Thebr_1094 type II secretion system protein E; PFAM: Type II secretion system protein E; General secretory system II, protein E, N-terminal; SMART: ATPase, AAA+ type, core. (558 aa)    
Predicted Functional Partners:
AEM78636.1
KEGG: tmt:Tmath_1113 type II secretion system F domain protein; manually curated; PFAM: Type II secretion system F domain.
 
 
 0.998
AEM78644.1
KEGG: tbo:Thebr_1104 cell division protein FtsA.
 
 
 0.965
AEM78637.1
KEGG: ttm:Tthe_1280 Tfp pilus assembly protein PilE-like protein protein.
 
 
 0.964
AEM78638.1
Peptidase A24A domain protein; Cleaves type-4 fimbrial leader sequence and methylates the N- terminal (generally Phe) residue.
 
 
 0.960
AEM78635.1
Twitching motility protein; TIGRFAM: Pilus retraction protein PilT; PFAM: Type II secretion system protein E; KEGG: tbo:Thebr_1095 twitching motility protein; SMART: ATPase, AAA+ type, core.
 
  
0.919
AEM78639.1
KEGG: tte:TTE1267 hypothetical protein.
  
 
 0.910
AEM78645.1
PFAM: Fimbrial assembly; KEGG: tbo:Thebr_1105 fimbrial assembly family protein.
  
 
 0.903
AEM78646.1
KEGG: tbo:Thebr_1106 hypothetical protein.
  
 
 0.870
AEM78640.1
KEGG: tmt:Tmath_1117 hypothetical protein.
  
 
 0.861
AEM78445.1
TIGRFAM: Competence protein ComEA, helix-hairpin-helix region; PFAM: Soluble ligand binding domain; Helix-hairpin-helix motif; KEGG: tmt:Tmath_0907 competence protein ComEA helix-hairpin-helix repeat protein; SMART: Helix-hairpin-helix DNA-binding motif, class 1.
  
  
 0.742
Your Current Organism:
Thermoanaerobacter wiegelii
NCBI taxonomy Id: 697303
Other names: T. wiegelii Rt8.B1, Thermoanaerobacter wiegelii Rt8.B1, Thermoanaerobacter wiegelii str. Rt8.B1, Thermoanaerobacter wiegelii strain Rt8.B1
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