STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEM78645.1PFAM: Fimbrial assembly; KEGG: tbo:Thebr_1105 fimbrial assembly family protein. (177 aa)    
Predicted Functional Partners:
AEM78646.1
KEGG: tbo:Thebr_1106 hypothetical protein.
 
 
 0.994
AEM78644.1
KEGG: tbo:Thebr_1104 cell division protein FtsA.
 
 
 0.987
AEM78634.1
KEGG: tbo:Thebr_1094 type II secretion system protein E; PFAM: Type II secretion system protein E; General secretory system II, protein E, N-terminal; SMART: ATPase, AAA+ type, core.
  
 
 0.903
AEM78639.1
KEGG: tte:TTE1267 hypothetical protein.
 
  
 0.863
AEM78636.1
KEGG: tmt:Tmath_1113 type II secretion system F domain protein; manually curated; PFAM: Type II secretion system F domain.
   
 
 0.845
AEM78648.1
KEGG: tbo:Thebr_1108 xylose isomerase domain-containing protein; PFAM: Xylose isomerase, TIM barrel domain; SMART: Endodeoxyribonuclease IV.
 
     0.793
AEM78643.1
PFAM: Late competence development protein ComFB; KEGG: tmt:Tmath_1120 late competence development protein ComFB.
       0.786
AEM78638.1
Peptidase A24A domain protein; Cleaves type-4 fimbrial leader sequence and methylates the N- terminal (generally Phe) residue.
     
 0.779
AEM78641.1
KEGG: tbo:Thebr_1101 hypothetical protein.
     
 0.768
AEM78642.1
KEGG: tbo:Thebr_1102 hypothetical protein.
     
 0.767
Your Current Organism:
Thermoanaerobacter wiegelii
NCBI taxonomy Id: 697303
Other names: T. wiegelii Rt8.B1, Thermoanaerobacter wiegelii Rt8.B1, Thermoanaerobacter wiegelii str. Rt8.B1, Thermoanaerobacter wiegelii strain Rt8.B1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.