STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEM78708.1PFAM: Glucose-inhibited division protein A-related; KEGG: tbo:Thebr_1168 glucose-inhibited division protein A. (427 aa)    
Predicted Functional Partners:
AEM78707.1
KEGG: thx:Thet_1326 hypothetical protein.
 
    0.958
mnmE
tRNA modification GTPase mnmE; Exhibits a very high intrinsic GTPase hydrolysis rate. Involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA- cmnm(5)s(2)U34; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. TrmE GTPase family.
  
 
 0.864
rsmG
Ribosomal RNA small subunit methyltransferase G; Specifically methylates the N7 position of a guanine in 16S rRNA; Belongs to the methyltransferase superfamily. RNA methyltransferase RsmG family.
  
  
 0.787
AEM78709.1
TIGRFAM: Pseudouridine synthase, RsuA and RluB/E/F; PFAM: Pseudouridine synthase, RsuA and RluB/C/D/E/F; RNA-binding S4; KEGG: tbo:Thebr_1169 pseudouridine synthase; SMART: RNA-binding S4.
  
    0.743
AEM78710.1
KEGG: tbo:Thebr_1170 hypothetical protein.
       0.710
AEM77575.1
KEGG: tbo:Thebr_2240 hypothetical protein.
  
     0.615
speE
Spermidine synthase; Catalyzes the irreversible transfer of a propylamine group from the amino donor S-adenosylmethioninamine (decarboxy-AdoMet) to putrescine (1,4-diaminobutane) to yield spermidine.
   
   0.603
AEM78712.1
Agmatinase; KEGG: tbo:Thebr_1172 agmatinase; TIGRFAM: Putative agmatinase; PFAM: Ureohydrolase; Belongs to the arginase family.
       0.582
AEM79788.1
KEGG: tbo:Thebr_0263 spore cortex biosynthesis protein YabQ; TIGRFAM: Spore cortex biosynthesis protein, YabQ; PFAM: Spore cortex biosynthesis protein, YabQ-like.
  
     0.560
AEM78490.1
Ubiquitin-associated- domain-containing protein; PFAM: Ubiquitin-associated/translation elongation factor EF1B, N-terminal; KEGG: tbo:Thebr_1390 ubiquitin-associated-domain-containing protein.
  
   0.537
Your Current Organism:
Thermoanaerobacter wiegelii
NCBI taxonomy Id: 697303
Other names: T. wiegelii Rt8.B1, Thermoanaerobacter wiegelii Rt8.B1, Thermoanaerobacter wiegelii str. Rt8.B1, Thermoanaerobacter wiegelii strain Rt8.B1
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