Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| AEM78631.1 | AEM78661.1 | Thewi_1208 | Thewi_1238 | RNA polymerase, sigma 28 subunit, SigK; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. | TIGRFAM: Sporulation stage III, protein AG; KEGG: thx:Thet_1372 stage III sporulation protein AG. | 0.770 |
| AEM78631.1 | AEM78692.1 | Thewi_1208 | Thewi_1269 | RNA polymerase, sigma 28 subunit, SigK; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. | KEGG: tbo:Thebr_1152 stage V sporulation protein AC; TIGRFAM: Sporulation stage V, protein AC; PFAM: SpoVA. | 0.770 |
| AEM78631.1 | AEM78693.1 | Thewi_1208 | Thewi_1270 | RNA polymerase, sigma 28 subunit, SigK; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. | Manually curated; TIGRFAM: Stage V sporulation AD; KEGG: tbo:Thebr_1153 stage V sporulation protein AD; PFAM: Stage V sporulation AD. | 0.770 |
| AEM78631.1 | AEM78694.1 | Thewi_1208 | Thewi_1271 | RNA polymerase, sigma 28 subunit, SigK; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. | KEGG: tbo:Thebr_1154 stage V sporulation protein AE; TIGRFAM: Sporulation stage V, protein AE; PFAM: SpoVA. | 0.768 |
| AEM78631.1 | AEM78865.1 | Thewi_1208 | Thewi_1443 | RNA polymerase, sigma 28 subunit, SigK; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. | PFAM: Small acid-soluble spore protein, alpha/beta-type; KEGG: tbo:Thebr_1332 alpha/beta type small acid-soluble spore protein. | 0.705 |
| AEM78631.1 | AEM78977.1 | Thewi_1208 | Thewi_1574 | RNA polymerase, sigma 28 subunit, SigK; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. | Stage IV sporulation protein A; ATPase. Has a role at an early stage in the morphogenesis of the spore coat. | 0.771 |
| AEM78631.1 | AEM78998.1 | Thewi_1208 | Thewi_1595 | RNA polymerase, sigma 28 subunit, SigK; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. | RNA polymerase, sigma 28 subunit, SigG; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. | 0.442 |
| AEM78631.1 | AEM79792.1 | Thewi_1208 | Thewi_2457 | RNA polymerase, sigma 28 subunit, SigK; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. | KEGG: tbo:Thebr_0259 sporulation protein YabP; TIGRFAM: Sporulation protein YabP; PFAM: Sporulation protein YabP. | 0.753 |
| AEM78631.1 | AEM79894.1 | Thewi_1208 | Thewi_2569 | RNA polymerase, sigma 28 subunit, SigK; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. | Stage V sporulation protein T; KEGG: tmt:Tmath_2137 transcriptional regulator, AbrB family; TIGRFAM: Sporulation stage V, protein T; Transcription regulator AbrB; PFAM: Transcription regulator AbrB/SpoV, predicted. | 0.765 |
| AEM78631.1 | gpr | Thewi_1208 | Thewi_1034 | RNA polymerase, sigma 28 subunit, SigK; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. | Germination protease; Initiates the rapid degradation of small, acid-soluble proteins during spore germination; Belongs to the peptidase A25 family. | 0.765 |
| AEM78661.1 | AEM78631.1 | Thewi_1238 | Thewi_1208 | TIGRFAM: Sporulation stage III, protein AG; KEGG: thx:Thet_1372 stage III sporulation protein AG. | RNA polymerase, sigma 28 subunit, SigK; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. | 0.770 |
| AEM78661.1 | AEM78692.1 | Thewi_1238 | Thewi_1269 | TIGRFAM: Sporulation stage III, protein AG; KEGG: thx:Thet_1372 stage III sporulation protein AG. | KEGG: tbo:Thebr_1152 stage V sporulation protein AC; TIGRFAM: Sporulation stage V, protein AC; PFAM: SpoVA. | 0.762 |
| AEM78661.1 | AEM78693.1 | Thewi_1238 | Thewi_1270 | TIGRFAM: Sporulation stage III, protein AG; KEGG: thx:Thet_1372 stage III sporulation protein AG. | Manually curated; TIGRFAM: Stage V sporulation AD; KEGG: tbo:Thebr_1153 stage V sporulation protein AD; PFAM: Stage V sporulation AD. | 0.787 |
| AEM78661.1 | AEM78694.1 | Thewi_1238 | Thewi_1271 | TIGRFAM: Sporulation stage III, protein AG; KEGG: thx:Thet_1372 stage III sporulation protein AG. | KEGG: tbo:Thebr_1154 stage V sporulation protein AE; TIGRFAM: Sporulation stage V, protein AE; PFAM: SpoVA. | 0.754 |
| AEM78661.1 | AEM78865.1 | Thewi_1238 | Thewi_1443 | TIGRFAM: Sporulation stage III, protein AG; KEGG: thx:Thet_1372 stage III sporulation protein AG. | PFAM: Small acid-soluble spore protein, alpha/beta-type; KEGG: tbo:Thebr_1332 alpha/beta type small acid-soluble spore protein. | 0.715 |
| AEM78661.1 | AEM78977.1 | Thewi_1238 | Thewi_1574 | TIGRFAM: Sporulation stage III, protein AG; KEGG: thx:Thet_1372 stage III sporulation protein AG. | Stage IV sporulation protein A; ATPase. Has a role at an early stage in the morphogenesis of the spore coat. | 0.856 |
| AEM78661.1 | AEM78998.1 | Thewi_1238 | Thewi_1595 | TIGRFAM: Sporulation stage III, protein AG; KEGG: thx:Thet_1372 stage III sporulation protein AG. | RNA polymerase, sigma 28 subunit, SigG; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. | 0.759 |
| AEM78661.1 | AEM79792.1 | Thewi_1238 | Thewi_2457 | TIGRFAM: Sporulation stage III, protein AG; KEGG: thx:Thet_1372 stage III sporulation protein AG. | KEGG: tbo:Thebr_0259 sporulation protein YabP; TIGRFAM: Sporulation protein YabP; PFAM: Sporulation protein YabP. | 0.775 |
| AEM78661.1 | AEM79894.1 | Thewi_1238 | Thewi_2569 | TIGRFAM: Sporulation stage III, protein AG; KEGG: thx:Thet_1372 stage III sporulation protein AG. | Stage V sporulation protein T; KEGG: tmt:Tmath_2137 transcriptional regulator, AbrB family; TIGRFAM: Sporulation stage V, protein T; Transcription regulator AbrB; PFAM: Transcription regulator AbrB/SpoV, predicted. | 0.782 |
| AEM78661.1 | gpr | Thewi_1238 | Thewi_1034 | TIGRFAM: Sporulation stage III, protein AG; KEGG: thx:Thet_1372 stage III sporulation protein AG. | Germination protease; Initiates the rapid degradation of small, acid-soluble proteins during spore germination; Belongs to the peptidase A25 family. | 0.768 |
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