STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEM78921.1KEGG: tmt:Tmath_1408 hypothetical protein. (319 aa)    
Predicted Functional Partners:
AEM78920.1
KEGG: thx:Thet_1089 RNA polymerase, sigma-24 subunit, ECF subfamily; TIGRFAM: RNA polymerase sigma-70; PFAM: RNA polymerase sigma factor 70, region 4 type 2; RNA polymerase sigma-70 region 2.
 
     0.949
AEM78251.1
NERD domain protein; PFAM: NERD; KEGG: tte:TTE0673 hypothetical protein.
  
     0.770
AEM78035.1
KEGG: tte:TTE0501 cell wall biosynthesis glycosyltransferase; PFAM: Glycosyl transferase, group 1; Glycosyl transferase, family 2; Tetratricopeptide TPR-1; SMART: Tetratricopeptide repeat.
  
     0.762
AEM79561.1
KEGG: tte:TTE1036 hypothetical protein.
  
     0.701
AEM77972.1
PFAM: Protein of unknown function DUF86; KEGG: tte:TTE0453 hypothetical protein.
  
     0.560
AEM79691.1
PFAM: Protein of unknown function DUF2275, transmembrane; KEGG: tit:Thit_2064 putative transmembrane anti-sigma factor.
  
     0.529
AEM79693.1
KEGG: tit:Thit_2066 hypothetical protein.
  
     0.515
AEM79782.1
Helix-turn-helix domain protein; KEGG: dau:Daud_0777 XRE family transcriptional regulator; PFAM: Helix-turn-helix type 3; SMART: Helix-turn-helix type 3.
  
     0.513
amj
Hypothetical protein; Involved in peptidoglycan biosynthesis. Transports lipid- linked peptidoglycan precursors from the inner to the outer leaflet of the cytoplasmic membrane.
  
     0.474
AEM79312.1
PFAM: Protein of unknown function DUF624; KEGG: thx:Thet_1851 hypothetical protein.
  
     0.462
Your Current Organism:
Thermoanaerobacter wiegelii
NCBI taxonomy Id: 697303
Other names: T. wiegelii Rt8.B1, Thermoanaerobacter wiegelii Rt8.B1, Thermoanaerobacter wiegelii str. Rt8.B1, Thermoanaerobacter wiegelii strain Rt8.B1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.