STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEM78923.1PFAM: PspC; KEGG: tmt:Tmath_1410 phage shock protein C, PspC. (61 aa)    
Predicted Functional Partners:
AEM79987.1
PFAM: PspA/IM30; KEGG: ttm:Tthe_0730 phage shock protein A, PspA.
  
 
 0.784
AEM79038.1
KEGG: tbo:Thebr_0806 hypothetical protein.
  
 
 0.781
AEM78461.1
PFAM: Membrane protein of unknown function; KEGG: tbo:Thebr_1438 hypothetical protein.
  
    0.654
AEM78924.1
KEGG: tmt:Tmath_1411 protein of unknown function UPF0047; TIGRFAM: Uncharacterised protein family UPF0047; PFAM: Uncharacterised protein family UPF0047.
       0.507
AEM79022.1
PFAM: Protein of unknown function DUF2089; KEGG: tte:TTE1660 hypothetical protein.
  
  
 0.475
AEM79043.1
Putative signal transduction histidine kinase; KEGG: tbo:Thebr_0801 sensor DegS domain-containing protein; PFAM: Sensor DegS; Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor region; ATP-binding region, ATPase-like; SMART: ATP-binding region, ATPase-like.
  
  
 0.475
Your Current Organism:
Thermoanaerobacter wiegelii
NCBI taxonomy Id: 697303
Other names: T. wiegelii Rt8.B1, Thermoanaerobacter wiegelii Rt8.B1, Thermoanaerobacter wiegelii str. Rt8.B1, Thermoanaerobacter wiegelii strain Rt8.B1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.