STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEM78959.1PFAM: Gluconate transporter; KEGG: tit:Thit_1448 gluconate transporter. (210 aa)    
Predicted Functional Partners:
AEM78960.1
KEGG: thx:Thet_1040 glycerate kinase; TIGRFAM: Glycerate kinase; PFAM: Glycerate kinase; Belongs to the glycerate kinase type-1 family.
 
  
 0.903
AEM78961.1
KEGG: tte:TTE1113 2-hydroxyglutaryl-CoA dehydratase activator; manually curated; PFAM: 2-hydroxyglutaryl-CoA dehydratase, D-component; ATPase, BadF/BadG/BcrA/BcrD type.
       0.604
AEM78962.1
PFAM: 2-hydroxyglutaryl-CoA dehydratase, D-component; KEGG: tbo:Thebr_0865 2-hydroxyglutaryl-CoA dehydratase D-component.
       0.557
AEM79121.1
PFAM: Carbohydrate kinase, FGGY, N-terminal; KEGG: Xylulokinase.
 
  
 0.460
AEM78524.1
KEGG: thx:Thet_1486 6-phosphogluconate dehydrogenase, decarboxylating; TIGRFAM: 6-phosphogluconate dehydrogenase related protein; PFAM: 6-phosphogluconate dehydrogenase, NAD-binding; 6-phosphogluconate dehydrogenase, C-terminal.
  
  
 0.454
AEM79261.1
PFAM: Carbohydrate kinase, FGGY, N-terminal; Carbohydrate kinase, FGGY, C-terminal; KEGG: kol:Kole_0162 carbohydrate kinase FGGY; Belongs to the FGGY kinase family.
 
  
 0.454
hisI
TIGRFAM: Phosphoribosyl-ATP pyrophosphohydrolase; HAMAP: Histidine biosynthesis bifunctional protein hisIE; KEGG: tit:Thit_1813 phosphoribosyl-ATP diphosphatase; PFAM: Phosphoribosyl-AMP cyclohydrolase; Phosphoribosyl-ATP pyrophosphohydrolase; In the N-terminal section; belongs to the PRA-CH family.
      
 0.412
Your Current Organism:
Thermoanaerobacter wiegelii
NCBI taxonomy Id: 697303
Other names: T. wiegelii Rt8.B1, Thermoanaerobacter wiegelii Rt8.B1, Thermoanaerobacter wiegelii str. Rt8.B1, Thermoanaerobacter wiegelii strain Rt8.B1
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