STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEM78997.1KEGG: tbo:Thebr_0845 sporulation protein, YlmC/YmxH family; TIGRFAM: Sporulation protein YlmC/YmxH; PFAM: PRC-barrel. (80 aa)    
Predicted Functional Partners:
AEM78998.1
RNA polymerase, sigma 28 subunit, SigG; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released.
 
     0.921
AEM78999.1
RNA polymerase, sigma 28 subunit, SigE; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released.
 
     0.891
AEM79000.1
Hypothetical protein; Probable aspartic protease that is responsible for the proteolytic cleavage of the RNA polymerase sigma E factor (SigE/spoIIGB) to yield the active peptide in the mother cell during sporulation. Responds to a signal from the forespore that is triggered by the extracellular signal protein SpoIIR. Belongs to the peptidase U4 family.
 
     0.874
AEM79883.1
KEGG: thx:Thet_2320 stage II sporulation protein R; TIGRFAM: Sporulation stage II, protein R; PFAM: Sporulation stage II, protein R.
 
     0.803
AEM78692.1
KEGG: tbo:Thebr_1152 stage V sporulation protein AC; TIGRFAM: Sporulation stage V, protein AC; PFAM: SpoVA.
  
    0.779
AEM79886.1
PFAM: Bacillus/Clostridium GerA spore germination protein; KEGG: tbo:Thebr_0186 GerA spore germination protein.
  
    0.772
AEM78860.1
KEGG: tbo:Thebr_1327 sporulation integral membrane protein YlbJ; TIGRFAM: Sporulation integral membrane protein YlbJ; PFAM: Nucleoside recognition.
  
     0.771
AEM79668.1
PFAM: Bacillus/Clostridium GerA spore germination protein; KEGG: tbo:Thebr_0321 GerA spore germination protein.
  
    0.771
AEM78658.1
KEGG: tbo:Thebr_1118 stage III sporulation protein AD; TIGRFAM: Sporulation stage III, protein AD; PFAM: Sporulation stage III, protein AD.
  
     0.767
AEM78659.1
KEGG: thx:Thet_1374 stage III sporulation protein AE; TIGRFAM: Sporulation stage III, protein AE; PFAM: Sporulation stage III, protein AE.
  
     0.767
Your Current Organism:
Thermoanaerobacter wiegelii
NCBI taxonomy Id: 697303
Other names: T. wiegelii Rt8.B1, Thermoanaerobacter wiegelii Rt8.B1, Thermoanaerobacter wiegelii str. Rt8.B1, Thermoanaerobacter wiegelii strain Rt8.B1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.