STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ftsLCell division protein FtsL; Essential cell division protein; Belongs to the FtsL family. (147 aa)    
Predicted Functional Partners:
AEM79005.1
Polypeptide-transport-associated domain protein FtsQ-type; Essential cell division protein.
 
 
 0.977
AEM79787.1
PFAM: Septum formation initiator; KEGG: tbo:Thebr_0264 septum formation initiator.
  
 
 
 0.955
rsmH
Ribosomal RNA small subunit methyltransferase H; Specifically methylates the N4 position of cytidine in position 1402 (C1402) of 16S rRNA.
  
  
 0.941
AEM79013.1
SMART: PASTA; manually curated; TIGRFAM: Stage V sporulation protein D; KEGG: tbo:Thebr_0829 stage V sporulation protein D; PFAM: Penicillin-binding protein, transpeptidase; Penicillin-binding protein, dimerisation domain; PASTA.
  
 
 0.905
mraZ
TIGRFAM: MraZ; HAMAP: MraZ; KEGG: thx:Thet_0919 MraZ protein; PFAM: MraZ domain; Belongs to the MraZ family.
  
  
 0.847
AEM79008.1
KEGG: tbo:Thebr_0834 stage V sporulation protein E; TIGRFAM: Stage V sporulation protein E; Cell division protein FtsW; PFAM: Cell cycle protein; Belongs to the SEDS family.
  
 
 0.764
AEM78576.1
KEGG: tbo:Thebr_1037 hypothetical protein.
  
     0.739
AEM79970.1
PFAM: Protein of unknown function YycH; KEGG: tit:Thit_2308 protein of unknown function YycH.
  
     0.708
AEM77679.1
KEGG: tte:TTE0165 hypothetical protein; PFAM: Cell surface receptor IPT/TIG; Fibronectin, type III; SMART: Fibronectin, type III; Cell surface receptor IPT/TIG.
  
     0.692
AEM77635.1
KEGG: tbo:Thebr_2180 hypothetical protein.
  
     0.673
Your Current Organism:
Thermoanaerobacter wiegelii
NCBI taxonomy Id: 697303
Other names: T. wiegelii Rt8.B1, Thermoanaerobacter wiegelii Rt8.B1, Thermoanaerobacter wiegelii str. Rt8.B1, Thermoanaerobacter wiegelii strain Rt8.B1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.