STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEM79040.1Sporulation uncharacterized protein YkwD; KEGG: tit:Thit_1507 SCP-like extracellular; TIGRFAM: Sporulation uncharacterised protein, YkwD; PFAM: SCP-like extracellular. (226 aa)    
Predicted Functional Partners:
AEM78083.1
ABC-type transporter, integral membrane subunit; PFAM: Bacterial inner-membrane translocator; KEGG: sth:STH801 branched-chain amino acid ABC transporter permease protein; Belongs to the binding-protein-dependent transport system permease family.
   
   0.652
AEM78182.1
ABC-type transporter, integral membrane subunit; PFAM: Bacterial inner-membrane translocator; KEGG: tmt:Tmath_0678 inner-membrane translocator; Belongs to the binding-protein-dependent transport system permease family.
   
   0.652
AEM79039.1
KEGG: thx:Thet_0897 hypothetical protein.
       0.548
nnrD
YjeF-related protein; Bifunctional enzyme that catalyzes the epimerization of the S- and R-forms of NAD(P)HX and the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. This allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration. Catalyzes the epimerization of the S- and R-forms of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration. This is a prerequisite for the S-specific NAD(P)H-hydrate dehydratase to allow the repair of both epi [...]
   
   0.409
AEM80022.1
KEGG: tbo:Thebr_2323 sporulation protein YyaC; TIGRFAM: Protein of unknown function DUF1256; PFAM: Protein of unknown function DUF1256.
  
   
 0.407
AEM78340.1
KEGG: tbo:Thebr_1544 cell wall hydrolase SleB; PFAM: Cell wall hydrolase, SleB; Peptidoglycan-binding lysin domain; SMART: Peptidoglycan-binding Lysin subgroup.
 
    0.401
Your Current Organism:
Thermoanaerobacter wiegelii
NCBI taxonomy Id: 697303
Other names: T. wiegelii Rt8.B1, Thermoanaerobacter wiegelii Rt8.B1, Thermoanaerobacter wiegelii str. Rt8.B1, Thermoanaerobacter wiegelii strain Rt8.B1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.