STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEM79068.1KEGG: tbo:Thebr_0778 hypothetical protein. (56 aa)    
Predicted Functional Partners:
AEM79069.1
KEGG: tit:Thit_1533 hypothetical protein.
       0.784
cobB
NAD-dependent deacetylase; NAD-dependent protein deacetylase which modulates the activities of several enzymes which are inactive in their acetylated form; Belongs to the sirtuin family. Class U subfamily.
       0.707
AEM79070.1
Nitrogen-fixing NifU domain-containing protein; PFAM: NIF system FeS cluster assembly, NifU, C-terminal; KEGG: tbo:Thebr_0775 nitrogen-fixing NifU domain-containing protein.
       0.540
AEM79066.1
KEGG: tmt:Tmath_1536 cold-shock DNA-binding domain protein; PFAM: Cold-shock protein, DNA-binding; SMART: Cold shock protein.
       0.529
hslO
33 kDa chaperonin; Redox regulated molecular chaperone. Protects both thermally unfolding and oxidatively damaged proteins from irreversible aggregation. Plays an important role in the bacterial defense system toward oxidative stress.
  
    0.453
AEM79071.1
KEGG: thx:Thet_0868 putative GAF sensor protein; PFAM: GAF; SMART: GAF.
       0.435
AEM79727.1
PFAM: PBS lyase HEAT-like repeat; KEGG: aoe:Clos_0613 heat repeat-containing PBS lyase.
  
     0.430
AEM79543.1
Hypothetical protein; Manually curated.
  
     0.429
AEM78186.1
Protein of unknown function UPF0236; PFAM: Uncharacterised protein family UPF0236; KEGG: tte:TTE2708 hypothetical protein.
  
     0.422
AEM78429.1
Protein of unknown function UPF0236; KEGG: tte:TTE2708 hypothetical protein; manually curated; PFAM: Uncharacterised protein family UPF0236.
  
     0.418
Your Current Organism:
Thermoanaerobacter wiegelii
NCBI taxonomy Id: 697303
Other names: T. wiegelii Rt8.B1, Thermoanaerobacter wiegelii Rt8.B1, Thermoanaerobacter wiegelii str. Rt8.B1, Thermoanaerobacter wiegelii strain Rt8.B1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.