STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEM79172.1KEGG: tbo:Thebr_0707 MATE efflux family protein; TIGRFAM: Multi antimicrobial extrusion protein MatE; PFAM: Multi antimicrobial extrusion protein MatE. (450 aa)    
Predicted Functional Partners:
AEM79173.1
Transcriptional regulator, Crp/Fnr family; KEGG: tbo:Thebr_0706 cyclic nucleotide-binding protein; PFAM: Cyclic nucleotide-binding; HTH transcriptional regulator, Crp; SMART: HTH transcriptional regulator, Crp.
       0.584
AEM79089.1
KEGG: tbo:Thebr_0753 glyceraldehyde-3-phosphate dehydrogenase; TIGRFAM: Glyceraldehyde-3-phosphate dehydrogenase, type I; PFAM: Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain; Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain.
  
  
 0.542
AEM78731.1
PFAM: Ribosomal protein S1, RNA binding domain; KEGG: tbo:Thebr_1199 RNA-binding S1 domain-containing protein.
  
    0.508
AEM79174.1
KEGG: tbo:Thebr_0705 hypothetical protein.
       0.431
AEM79171.1
KEGG: thx:Thet_1710 GntR family transcriptional regulator; PFAM: Regulator of K+ conductance, C-terminal; HTH transcriptional regulator, GntR; SMART: HTH transcriptional regulator, GntR.
     
 0.419
Your Current Organism:
Thermoanaerobacter wiegelii
NCBI taxonomy Id: 697303
Other names: T. wiegelii Rt8.B1, Thermoanaerobacter wiegelii Rt8.B1, Thermoanaerobacter wiegelii str. Rt8.B1, Thermoanaerobacter wiegelii strain Rt8.B1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.