STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEM79184.1KEGG: tbo:Thebr_0695 hypothetical protein. (80 aa)    
Predicted Functional Partners:
whiA
Sporulation transcription regulator whiA; Involved in cell division and chromosome segregation.
       0.560
AEM79182.1
KEGG: tbo:Thebr_0697 phosphocarrier, HPr family; TIGRFAM: Phosphotransferase system, phosphocarrier HPr protein; PFAM: Phosphotransferase system, phosphocarrier HPr protein.
       0.547
AEM79185.1
KEGG: tbo:Thebr_0694 alpha amylase catalytic subunit; PFAM: Glycosyl hydrolase, family 13, catalytic region; Glycoside hydrolase, family 13, N-terminal Ig-like region; SMART: Glycosyl hydrolase, family 13, subfamily, catalytic region.
       0.543
AEM79186.1
KEGG: thx:Thet_1724 hypothetical protein.
       0.529
AEM79180.1
TIGRFAM: DNA polymerase III, alpha subunit; PFAM: Bacterial DNA polymerase III, alpha subunit; PHP, C-terminal; Nucleic acid binding, OB-fold, tRNA/helicase-type; KEGG: tbo:Thebr_0699 DNA polymerase III subunit alpha; SMART: Polymerase/histidinol phosphatase, N-terminal.
       0.453
AEM79181.1
Putative signal transduction protein with CBS and DRTGG domains; KEGG: tbo:Thebr_0698 DRTGG domain-containing protein; PFAM: DRTGG; Cystathionine beta-synthase, core; SMART: Cystathionine beta-synthase, core.
       0.436
Your Current Organism:
Thermoanaerobacter wiegelii
NCBI taxonomy Id: 697303
Other names: T. wiegelii Rt8.B1, Thermoanaerobacter wiegelii Rt8.B1, Thermoanaerobacter wiegelii str. Rt8.B1, Thermoanaerobacter wiegelii strain Rt8.B1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.