STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEM79258.1KEGG: tro:trd_1320 hypothetical protein. (253 aa)    
Predicted Functional Partners:
AEM79257.1
KEGG: tro:trd_1319 Ser/Thr protein phosphatase family protein.
 
     0.947
AEM79259.1
PFAM: Amino acid permease-associated region; KEGG: tro:trd_1316 amino acid permease superfamily.
 
     0.941
AEM79256.1
PFAM: Inositol monophosphatase; KEGG: wch:wcw_1759 putative monophosphatase.
       0.757
AEM79262.1
KEGG: kol:Kole_0161 photosystem I assembly BtpA; TIGRFAM: Photosystem I assembly BtpA; PFAM: Photosystem I assembly BtpA.
  
     0.431
Your Current Organism:
Thermoanaerobacter wiegelii
NCBI taxonomy Id: 697303
Other names: T. wiegelii Rt8.B1, Thermoanaerobacter wiegelii Rt8.B1, Thermoanaerobacter wiegelii str. Rt8.B1, Thermoanaerobacter wiegelii strain Rt8.B1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.