STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEM79259.1PFAM: Amino acid permease-associated region; KEGG: tro:trd_1316 amino acid permease superfamily. (527 aa)    
Predicted Functional Partners:
AEM79258.1
KEGG: tro:trd_1320 hypothetical protein.
 
     0.941
AEM79257.1
KEGG: tro:trd_1319 Ser/Thr protein phosphatase family protein.
 
     0.938
AEM79256.1
PFAM: Inositol monophosphatase; KEGG: wch:wcw_1759 putative monophosphatase.
  
  
 0.739
AEM77594.1
KEGG: tit:Thit_0062 alpha amylase catalytic region; PFAM: Glycosyl hydrolase, family 13, catalytic region; Glycoside hydrolase, family 13, N-terminal Ig-like region; Fibronectin, type III; Glycoside hydrolase, carbohydrate-binding; S-layer homology region; SMART: Glycosyl hydrolase, family 13, subfamily, catalytic region; Alpha-amylase, C-terminal all beta; Fibronectin, type III; Belongs to the glycosyl hydrolase 13 family.
   
 0.636
AEM79185.1
KEGG: tbo:Thebr_0694 alpha amylase catalytic subunit; PFAM: Glycosyl hydrolase, family 13, catalytic region; Glycoside hydrolase, family 13, N-terminal Ig-like region; SMART: Glycosyl hydrolase, family 13, subfamily, catalytic region.
   
 0.636
AEM79192.1
KEGG: thx:Thet_1730 alpha amylase catalytic region; PFAM: Glycosyl hydrolase, family 13, catalytic region; Alpha-amylase, C-terminal all beta; SMART: Glycosyl hydrolase, family 13, subfamily, catalytic region; Alpha-amylase, C-terminal all beta.
   
 0.636
Your Current Organism:
Thermoanaerobacter wiegelii
NCBI taxonomy Id: 697303
Other names: T. wiegelii Rt8.B1, Thermoanaerobacter wiegelii Rt8.B1, Thermoanaerobacter wiegelii str. Rt8.B1, Thermoanaerobacter wiegelii strain Rt8.B1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.