STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEM79261.1PFAM: Carbohydrate kinase, FGGY, N-terminal; Carbohydrate kinase, FGGY, C-terminal; KEGG: kol:Kole_0162 carbohydrate kinase FGGY; Belongs to the FGGY kinase family. (500 aa)    
Predicted Functional Partners:
xylA
TIGRFAM: Xylose isomerase, bacterial type; HAMAP: Xylose isomerase; KEGG: tbo:Thebr_2104 xylose isomerase; PFAM: Xylose isomerase, TIM barrel domain; Belongs to the xylose isomerase family.
 
 
 0.962
AEM78873.1
Manually curated; PFAM: Ribulose-phosphate 3-epimerase; Belongs to the ribulose-phosphate 3-epimerase family.
 
 
 0.943
AEM77698.1
PFAM: Class II aldolase/adducin, N-terminal; KEGG: class II aldolase/adducin family protein.
  
 
 0.937
AEM79121.1
PFAM: Carbohydrate kinase, FGGY, N-terminal; KEGG: Xylulokinase.
  
  
 
0.929
xylB
Xylulokinase; KEGG: tbo:Thebr_2103 xylulokinase; TIGRFAM: Xylulokinase; PFAM: Carbohydrate kinase, FGGY, N-terminal; Carbohydrate kinase, FGGY, C-terminal.
  
  
 
0.917
AEM79262.1
KEGG: kol:Kole_0161 photosystem I assembly BtpA; TIGRFAM: Photosystem I assembly BtpA; PFAM: Photosystem I assembly BtpA.
 
     0.853
AEM79260.1
KEGG: kol:Kole_0163 short-chain dehydrogenase/reductase SDR; manually curated; PFAM: Short-chain dehydrogenase/reductase SDR.
 
  
 0.814
AEM79263.1
KEGG: tle:Tlet_1417 DeoR family transcriptional regulator; PFAM: HTH transcriptional regulator, DeoR; HTH transcriptional regulator, DeoR N-terminal; SMART: HTH transcriptional regulator, DeoR N-terminal.
  
  
 0.751
AEM78959.1
PFAM: Gluconate transporter; KEGG: tit:Thit_1448 gluconate transporter.
 
  
 0.454
AEM79860.1
PFAM: Alcohol dehydrogenase, iron-type; Aldehyde dehydrogenase; KEGG: thx:Thet_2299 iron-containing alcohol dehydrogenase.
  
  
 0.436
Your Current Organism:
Thermoanaerobacter wiegelii
NCBI taxonomy Id: 697303
Other names: T. wiegelii Rt8.B1, Thermoanaerobacter wiegelii Rt8.B1, Thermoanaerobacter wiegelii str. Rt8.B1, Thermoanaerobacter wiegelii strain Rt8.B1
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