STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEM79269.1KEGG: cob:COB47_2256 plasmid pRiA4b ORF-3 family protein. (242 aa)    
Predicted Functional Partners:
AEM79272.1
PFAM: Secretion protein HlyD; KEGG: ttm:Tthe_0336 secretion protein HlyD family protein; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 
     0.609
AEM79981.1
KEGG: thx:Thet_2398 transposase, IS605 OrfB family; TIGRFAM: Transposase, IS605 OrfB, C-terminal; PFAM: Transposase, IS605 OrfB, C-terminal; Transposase, probable, IS891/IS1136/IS1341.
  
     0.576
AEM78035.1
KEGG: tte:TTE0501 cell wall biosynthesis glycosyltransferase; PFAM: Glycosyl transferase, group 1; Glycosyl transferase, family 2; Tetratricopeptide TPR-1; SMART: Tetratricopeptide repeat.
  
     0.556
AEM78271.1
KEGG: tbo:Thebr_1648 hypothetical protein; TIGRFAM: Conserved hypothetical protein CHP02678; PFAM: Conserved hypothetical protein CHP02678.
  
     0.547
AEM78273.1
Hypothetical protein; Manually curated.
  
     0.545
AEM78251.1
NERD domain protein; PFAM: NERD; KEGG: tte:TTE0673 hypothetical protein.
  
     0.538
AEM79270.1
PFAM: ABC-2 type transporter; KEGG: cac:CA_C3268 hypothetical protein.
       0.536
AEM79271.1
KEGG: ttm:Tthe_0335 ABC transporter related; PFAM: ABC transporter-like; SMART: ATPase, AAA+ type, core.
       0.536
AEM78270.1
KEGG: thx:Thet_0686 hypothetical protein; TIGRFAM: Conserved hypothetical protein CHP02677; PFAM: Conserved hypothetical protein CHP02677.
  
     0.529
AEM78272.1
TIGRFAM: Conserved hypothetical protein CHP02680; KEGG: tit:Thit_0689 chromosome segregation ATPase-like protein.
  
     0.524
Your Current Organism:
Thermoanaerobacter wiegelii
NCBI taxonomy Id: 697303
Other names: T. wiegelii Rt8.B1, Thermoanaerobacter wiegelii Rt8.B1, Thermoanaerobacter wiegelii str. Rt8.B1, Thermoanaerobacter wiegelii strain Rt8.B1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.