Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
AEM79305.1KEGG: thx:Thet_1841 LacI family transcriptional regulator; PFAM: Periplasmic binding protein/LacI transcriptional regulator; HTH transcriptional regulator, LacI; SMART: HTH transcriptional regulator, LacI. (330 aa)    
Predicted Functional Partners:
AEM79182.1
KEGG: tbo:Thebr_0697 phosphocarrier, HPr family; TIGRFAM: Phosphotransferase system, phosphocarrier HPr protein; PFAM: Phosphotransferase system, phosphocarrier HPr protein.
   
 
 0.612
AEM79304.1
Oxidoreductase domain protein; PFAM: Oxidoreductase, N-terminal; Oxidoreductase, C-terminal; KEGG: tbo:Thebr_0606 oxidoreductase domain-containing protein.
     
 0.602
AEM79303.1
Oxidoreductase domain protein; PFAM: Oxidoreductase, N-terminal; Oxidoreductase, C-terminal; KEGG: thx:Thet_1839 oxidoreductase domain-containing protein.
     
 0.582
AEM79301.1
PFAM: Xylose isomerase, TIM barrel domain; AP endonuclease, family 2, C-terminal; KEGG: tbo:Thebr_0609 xylose isomerase domain-containing protein.
  
  
 0.575
AEM79302.1
PFAM: Xylose isomerase, TIM barrel domain; KEGG: tbo:Thebr_0608 xylose isomerase domain-containing protein.
  
  
 0.575
AEM79177.1
KEGG: thx:Thet_1715 pyruvate kinase; TIGRFAM: Pyruvate kinase; PFAM: Pyruvate kinase, barrel; Pyruvate kinase, alpha/beta; PEP-utilising enzyme, mobile region.
   
 
 0.490
AEM79306.1
YcfA family protein; PFAM: YcfA-like; KEGG: tbo:Thebr_0602 YcfA family protein.
       0.429
AEM79307.1
KEGG: thx:Thet_1845 hypothetical protein.
       0.429
ribBA
GTP cyclohydrolase-2; Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate; In the C-terminal section; belongs to the GTP cyclohydrolase II family.
    
   0.418
Your Current Organism:
Thermoanaerobacter wiegelii
NCBI taxonomy Id: 697303
Other names: T. wiegelii Rt8.B1, Thermoanaerobacter wiegelii Rt8.B1, Thermoanaerobacter wiegelii str. Rt8.B1, Thermoanaerobacter wiegelii strain Rt8.B1
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