STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEM79359.1KEGG: tbo:Thebr_0569 hypothetical protein. (168 aa)    
Predicted Functional Partners:
AEM77636.1
KEGG: tbo:Thebr_2179 hypothetical protein.
  
     0.763
AEM79251.1
KEGG: tmt:Tmath_1677 hypothetical protein.
  
     0.695
AEM78815.1
TIGRFAM: Flagellar export FliJ; KEGG: tbo:Thebr_1282 flagellar export protein FliJ.
  
     0.685
AEM79791.1
KEGG: tbo:Thebr_0260 hypothetical protein.
 
     0.618
AEM79358.1
KEGG: tbo:Thebr_0572 HAD-superfamily hydrolase; TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 3; HAD-superfamily hydrolase, subfamily IA, variant 1; PFAM: Haloacid dehalogenase-like hydrolase.
       0.567
AEM79038.1
KEGG: tbo:Thebr_0806 hypothetical protein.
  
     0.554
AEM78323.1
KEGG: tbo:Thebr_1561 hypothetical protein.
  
     0.548
AEM78113.1
PFAM: Transposase, IS4-like; KEGG: tbo:Thebr_1887 transposase IS4 family protein.
  
     0.519
AEM77851.1
PFAM: Transposase, IS4-like; KEGG: tbo:Thebr_1887 transposase IS4 family protein.
  
     0.515
AEM79123.1
PFAM: Transposase, IS4-like; KEGG: tbo:Thebr_1887 transposase IS4 family protein.
  
     0.515
Your Current Organism:
Thermoanaerobacter wiegelii
NCBI taxonomy Id: 697303
Other names: T. wiegelii Rt8.B1, Thermoanaerobacter wiegelii Rt8.B1, Thermoanaerobacter wiegelii str. Rt8.B1, Thermoanaerobacter wiegelii strain Rt8.B1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.