STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEM79418.1Hypothetical protein; Manually curated; KEGG: cki:Calkr_1251 transposase IS4 family protein. (590 aa)    
Predicted Functional Partners:
AEM79540.1
PFAM: Transposase, IS4-like; KEGG: has:Halsa_0720 hypothetical protein.
  
     0.611
AEM79724.1
PFAM: Uncharacterised protein family UPF0150; KEGG: tmt:Tmath_0096 protein of unknown function UPF0150.
  
     0.529
AEM79463.1
Prevent-host-death family protein; Antitoxin component of a type II toxin-antitoxin (TA) system.
  
     0.471
AEM79419.1
KEGG: thx:Thet_2352 integrase catalytic region.
       0.464
AEM79417.1
PFAM: Integrase, catalytic core; KEGG: thx:Thet_2352 integrase catalytic region.
       0.437
AEM79744.1
KEGG: tbo:Thebr_2259 hypothetical protein.
  
     0.424
AEM78268.1
YcfA family protein; PFAM: YcfA-like; KEGG: ate:Athe_2005 YcfA family protein.
  
     0.400
Your Current Organism:
Thermoanaerobacter wiegelii
NCBI taxonomy Id: 697303
Other names: T. wiegelii Rt8.B1, Thermoanaerobacter wiegelii Rt8.B1, Thermoanaerobacter wiegelii str. Rt8.B1, Thermoanaerobacter wiegelii strain Rt8.B1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.