STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEM79450.1KEGG: thx:Thet_2277 ABC transporter-like protein; PFAM: ABC transporter-like; SMART: ATPase, AAA+ type, core. (308 aa)    
Predicted Functional Partners:
AEM79451.1
KEGG: thx:Thet_2276 hypothetical protein.
 
 
 0.948
AEM79270.1
PFAM: ABC-2 type transporter; KEGG: cac:CA_C3268 hypothetical protein.
 
  
 0.920
AEM79449.1
KEGG: thx:Thet_2278 hypothetical protein.
  
    0.794
AEM79448.1
KEGG: thx:Thet_2279 hypothetical protein.
  
    0.764
AEM79446.1
KEGG: thx:Thet_2281 RNA polymerase, sigma-24 subunit, ECF subfamily; TIGRFAM: RNA polymerase sigma-70; PFAM: RNA polymerase sigma factor 70, region 4 type 2; RNA polymerase sigma-70 region 2.
  
    0.757
AEM79447.1
KEGG: thx:Thet_2280 hypothetical protein.
       0.751
AEM79407.1
PFAM: ABC-2 type transporter; KEGG: tbo:Thebr_0521 ABC-2 type transporter.
 
 
 0.671
AEM79693.1
KEGG: tit:Thit_2066 hypothetical protein.
  
 
 0.603
AEM79872.1
PFAM: ABC-2 type transporter; KEGG: tbo:Thebr_0201 ABC-2 type transporter.
 
  
 0.531
AEM79452.1
Sporulation protein YtaF; Probably functions as a manganese efflux pump.
       0.517
Your Current Organism:
Thermoanaerobacter wiegelii
NCBI taxonomy Id: 697303
Other names: T. wiegelii Rt8.B1, Thermoanaerobacter wiegelii Rt8.B1, Thermoanaerobacter wiegelii str. Rt8.B1, Thermoanaerobacter wiegelii strain Rt8.B1
Server load: medium (46%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.