Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AEM79451.1KEGG: thx:Thet_2276 hypothetical protein. (252 aa)    
Predicted Functional Partners:
AEM79450.1
KEGG: thx:Thet_2277 ABC transporter-like protein; PFAM: ABC transporter-like; SMART: ATPase, AAA+ type, core.
 
 
 0.921
AEM79448.1
KEGG: thx:Thet_2279 hypothetical protein.
 
    0.919
AEM79449.1
KEGG: thx:Thet_2278 hypothetical protein.
  
    0.905
AEM79446.1
KEGG: thx:Thet_2281 RNA polymerase, sigma-24 subunit, ECF subfamily; TIGRFAM: RNA polymerase sigma-70; PFAM: RNA polymerase sigma factor 70, region 4 type 2; RNA polymerase sigma-70 region 2.
 
    0.823
AEM79447.1
KEGG: thx:Thet_2280 hypothetical protein.
       0.763
AEM77584.1
PFAM: Beta-galactosidase trimerisation; Glycoside hydrolase, family 5; KEGG: tbo:Thebr_2228 beta-galactosidase trimerisation domain-containing protein; Belongs to the glycosyl hydrolase 5 (cellulase A) family.
  
     0.583
AEM79874.1
KEGG: tbo:Thebr_0199 ABC transporter-like protein; PFAM: ABC transporter-like; SMART: ATPase, AAA+ type, core.
 
 
 0.571
AEM79266.1
Hypothetical protein; Manually curated; KEGG: tte:TTE1567 hypothetical protein.
  
    0.532
AEM79452.1
Sporulation protein YtaF; Probably functions as a manganese efflux pump.
       0.517
AEM77827.1
KEGG: thx:Thet_0286 aminopeptidase-like protein.
  
     0.506
Your Current Organism:
Thermoanaerobacter wiegelii
NCBI taxonomy Id: 697303
Other names: T. wiegelii Rt8.B1, Thermoanaerobacter wiegelii Rt8.B1, Thermoanaerobacter wiegelii str. Rt8.B1, Thermoanaerobacter wiegelii strain Rt8.B1
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