Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AEM79491.1KEGG: thx:Thet_2400 hypothetical protein. (74 aa)    
Predicted Functional Partners:
AEM79490.1
KEGG: tpt:Tpet_1768 hypothetical protein.
       0.773
AEM79744.1
KEGG: tbo:Thebr_2259 hypothetical protein.
  
     0.656
AEM78266.1
PFAM: Nucleotidyltransferase; KEGG: tbo:Thebr_1652 DNA polymerase beta domain-containing protein region.
  
     0.597
AEM79489.1
KEGG: tbo:Thebr_0102 beta-lactamase domain-containing protein.
 
     0.505
AEM79102.1
PFAM: Iron dependent repressor; KEGG: tbo:Thebr_0741 iron dependent repressor.
  
     0.484
AEM77642.1
KEGG: tbo:Thebr_2173 hypothetical protein.
  
     0.468
AEM78678.1
KEGG: tbo:Thebr_1138 hypothetical protein.
  
     0.464
AEM79038.1
KEGG: tbo:Thebr_0806 hypothetical protein.
  
     0.456
AEM79669.1
KEGG: tbo:Thebr_0320 spore germination protein; TIGRFAM: Spore germination GerAB; PFAM: Spore germination GerAB.
  
    0.443
AEM78217.1
KEGG: tmt:Tmath_0712 hypothetical protein.
  
     0.437
Your Current Organism:
Thermoanaerobacter wiegelii
NCBI taxonomy Id: 697303
Other names: T. wiegelii Rt8.B1, Thermoanaerobacter wiegelii Rt8.B1, Thermoanaerobacter wiegelii str. Rt8.B1, Thermoanaerobacter wiegelii strain Rt8.B1
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